RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	RTC3	P38804	111 aa	Predicted RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	PRM9	P39551	298 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	SAW1	P39735	261 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	YMR134W	P40207	237 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	RLP7	P40693	322 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	ZIM17	P42844	174 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	GCN20	P43535	752 aa	Known RBP	4.96	□□□□□ -1.62
DOA1	YKL213C	ECL1	P48235	211 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	KXD1	P53158	218 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	FYV6	P53913	173 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	NIS1	P53939	407 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ASI1	P54074	624 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ARA2	Q04212	335 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	BSP1	Q06604	576 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	TPO1	Q07824	586 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	IOC2	Q12072	812 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
DOA1	YKL213C	SVS1	Q12254	260 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	MPD2	Q99316	277 aa		4.96	□□□□□ -1.62
DOA1	YKL213C	ENO2	P00925	437 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	SUI3	P09064	285 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	MET16	P18408	261 aa	Predicted RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	HSP60	P19882	572 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	YCR015C	P25616	317 aa		4.95	□□□□□ -1.62
DOA1	YKL213C	HXT3	P32466	567 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	SSE1	P32589	693 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	MRS6	P32864	603 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	POP7	P38291	140 aa		4.95	□□□□□ -1.62
DOA1	YKL213C	FSH1	P38777	243 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	MKT1	P40850	830 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	NMD5	P46970	1048 aa		4.95	□□□□□ -1.62
DOA1	YKL213C	UBX4	P54730	416 aa		4.95	□□□□□ -1.62
DOA1	YKL213C	UTP6	Q02354	440 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	INA17	Q02888	182 aa		4.95	□□□□□ -1.62
DOA1	YKL213C	RSC58	Q07979	502 aa		4.95	□□□□□ -1.62
DOA1	YKL213C	FAP7	Q12055	197 aa	Predicted RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	LPX1	Q12405	387 aa	Known RBP	4.95	□□□□□ -1.62
DOA1	YKL213C	HIS3	P06633	220 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	HIS5	P07172	385 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	HO	P09932	586 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RPO26	P20435	155 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	CPR5	P35176	225 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	DUG2	P38149	878 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	YBR242W	P38331	238 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	ZRG8	P40021	1076 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	JEM1	P40358	645 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	NEO1	P40527	1151 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RRT5	P43607	289 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	ALY2	P47029	1046 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RTT101	P47050	842 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	HLJ1	P48353	224 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RFX1	P48743	811 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	TOM22	P49334	152 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	PRP31	P49704	494 aa	Predicted RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	SFB2	P53953	876 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	PIR3	Q03180	325 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	SYO1	Q07395	620 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	NUR1	Q12066	484 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	FAB1	P34756	2278 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	CDC8	P00572	216 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	FUR4	P05316	633 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	RPS14A	P06367	137 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	PRP6	P19735	899 aa	Predicted RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	PRP9	P19736	530 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	PPH22	P23595	377 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RPN2	P32565	945 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	YPT52	P36018	234 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	POL12	P38121	705 aa	Predicted RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	VHC1	P38329	1120 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	AIM18	P38884	321 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RPS14B	P39516	138 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	UFE1	P41834	346 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RGD2	P43556	714 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	BNA6	P43619	295 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	MNN11	P46985	422 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	ALB1	P47019	175 aa	Predicted RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	BNA1	P47096	177 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	RPL22B	P56628	122 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	YHM2	Q04013	314 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	SPC2	Q04969	178 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	NOP6	Q07623	225 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	REX3	Q12090	404 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	GPM3	Q12326	303 aa		4.94	□□□□□ -1.62
DOA1	YKL213C	PDH1	Q12428	516 aa	Known RBP	4.94	□□□□□ -1.62
DOA1	YKL213C	HIS1	P00498	297 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	YML002W	P0CF17	737 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	ECM2	P38241	364 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	IFA38	P38286	347 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	URA8	P38627	578 aa	Predicted RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	DIA4	P38705	446 aa	Predicted RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	DSS1	P39112	969 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	EDC3	P39998	551 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	YIL161W	P40449	235 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	YNL320W	P42840	284 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	CNN1	P43618	361 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	YJR079W	P47126	109 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	MRX6	P48564	524 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	COQ6	P53318	479 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	VPS9	P54787	451 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	EGD1	Q02642	157 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms