RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W CRG1P38892 291 aaRIP-Chip data4.54□□□□□ -1.68not detected
TFA1YKL028W VPS45P38932 577 aa4.54□□□□□ -1.68
TFA1YKL028W ECM1P39715 212 aa4.54□□□□□ -1.68
TFA1YKL028W ZRG8P40021 1076 aa4.54□□□□□ -1.68
TFA1YKL028W FTR1P40088 404 aa4.54□□□□□ -1.68
TFA1YKL028W DOT5P40553 215 aa4.54□□□□□ -1.68
TFA1YKL028W MKT1P40850 830 aaKnown RBP4.54□□□□□ -1.68
TFA1YKL028W COX18P53239 316 aa4.54□□□□□ -1.68
TFA1YKL028W ASI2P53895 289 aa4.54□□□□□ -1.68
TFA1YKL028W RBA50Q04418 439 aa4.54□□□□□ -1.68
TFA1YKL028W RQC1Q05468 723 aaKnown RBP4.54□□□□□ -1.68
TFA1YKL028W MRD1Q06106 887 aaKnown RBP4.54□□□□□ -1.68
TFA1YKL028W TMA10Q06177 86 aa4.54□□□□□ -1.68
TFA1YKL028W TCO89Q08921 799 aa4.54□□□□□ -1.68
TFA1YKL028W ATG29Q12092 213 aa4.54□□□□□ -1.68
TFA1YKL028W RTC5Q12108 567 aaKnown RBP4.54□□□□□ -1.68
TFA1YKL028W HER1Q12276 1246 aa4.54□□□□□ -1.68
TFA1YKL028W CTF3Q12748 733 aa4.54□□□□□ -1.68
TFA1YKL028W SPE1P08432 466 aa4.53□□□□□ -1.68
TFA1YKL028W PRE2P30656 287 aaKnown RBP4.53□□□□□ -1.68
TFA1YKL028W LTV1P34078 463 aa4.53□□□□□ -1.68
TFA1YKL028W ATG19P35193 415 aa4.53□□□□□ -1.68
TFA1YKL028W MIC60P36112 540 aa4.53□□□□□ -1.68
TFA1YKL028W GEX2P36173 615 aa4.53□□□□□ -1.68
TFA1YKL028W YBR259WP38338 688 aa4.53□□□□□ -1.68
TFA1YKL028W SIC1P38634 284 aa4.53□□□□□ -1.68
TFA1YKL028W YHR112CP38716 378 aa4.53□□□□□ -1.68
TFA1YKL028W MUP3P38734 546 aa4.53□□□□□ -1.68
TFA1YKL028W BFR1P38934 470 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
TFA1YKL028W MRX1P40050 688 aa4.53□□□□□ -1.68
TFA1YKL028W GCD10P41814 478 aa4.53□□□□□ -1.68
TFA1YKL028W CAK1P43568 368 aaPredicted RBP4.53□□□□□ -1.68
TFA1YKL028W LCL3P53153 274 aa4.53□□□□□ -1.68
TFA1YKL028W SLI1P53304 468 aa4.53□□□□□ -1.68
TFA1YKL028W RPA49Q01080 415 aaPredicted RBP4.53□□□□□ -1.68
TFA1YKL028W PLB2Q03674 706 aa4.53□□□□□ -1.68
TFA1YKL028W YML037CQ03703 340 aa4.53□□□□□ -1.68
TFA1YKL028W DBP9Q06218 594 aaKnown RBP4.53□□□□□ -1.68
TFA1YKL028W PML1Q07930 204 aaPredicted RBP4.53□□□□□ -1.68
TFA1YKL028W BUD7Q08754 746 aa4.53□□□□□ -1.68
TFA1YKL028W POM34Q12445 299 aa4.53□□□□□ -1.68
TFA1YKL028W YLR415CO13578 112 aa4.52□□□□□ -1.69
TFA1YKL028W RPS9BP05755 195 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W RPL1AP0CX43 217 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W RPL1BP0CX44 217 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W SEC12P11655 471 aa4.52□□□□□ -1.69
TFA1YKL028W TUP1P16649 713 aa4.52□□□□□ -1.69
TFA1YKL028W RNR1P21524 888 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W YPT53P36019 220 aa4.52□□□□□ -1.69
TFA1YKL028W EHT1P38295 451 aa4.52□□□□□ -1.69
TFA1YKL028W ERC1P38767 581 aa4.52□□□□□ -1.69
TFA1YKL028W SPT8P38915 602 aa4.52□□□□□ -1.69
TFA1YKL028W REV7P38927 245 aa4.52□□□□□ -1.69
TFA1YKL028W CCT6P39079 546 aa4.52□□□□□ -1.69
TFA1YKL028W SGN1P40561 250 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
TFA1YKL028W AIP1P46680 615 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W PDR16P53860 351 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W KAP120Q02932 1032 aa4.52□□□□□ -1.69
TFA1YKL028W CWC21Q03375 135 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W SOV1Q04748 898 aa4.52□□□□□ -1.69
TFA1YKL028W DON1Q05610 365 aa4.52□□□□□ -1.69
TFA1YKL028W STP3Q05937 343 aa4.52□□□□□ -1.69
TFA1YKL028W CHS5Q12114 671 aaKnown RBP4.52□□□□□ -1.69
TFA1YKL028W GAL10P04397 699 aa4.51□□□□□ -1.69
TFA1YKL028W CLC1P17891 233 aa4.51□□□□□ -1.69
TFA1YKL028W DBP3P20447 523 aaKnown RBP4.51□□□□□ -1.69
TFA1YKL028W GRR1P24814 1151 aa4.51□□□□□ -1.69
TFA1YKL028W HCM1P25364 564 aa4.51□□□□□ -1.69
TFA1YKL028W STE14P32584 239 aa4.51□□□□□ -1.69
TFA1YKL028W VPS17P32913 551 aa4.51□□□□□ -1.69
TFA1YKL028W YSW1P38280 609 aa4.51□□□□□ -1.69
TFA1YKL028W STU2P46675 888 aa4.51□□□□□ -1.69
TFA1YKL028W DLD2P46681 530 aaKnown RBP4.51□□□□□ -1.69
TFA1YKL028W LYS4P49367 693 aaPredicted RBP4.51□□□□□ -1.69
TFA1YKL028W YGR111WP53265 400 aa4.51□□□□□ -1.69
TFA1YKL028W ARP5P53946 755 aa4.51□□□□□ -1.69
TFA1YKL028W MAK10Q02197 733 aa4.51□□□□□ -1.69
TFA1YKL028W MTG1Q03151 367 aaPredicted RBP4.51□□□□□ -1.69
TFA1YKL028W YDR239CQ03780 787 aa4.51□□□□□ -1.69
TFA1YKL028W RSM24Q03976 319 aa4.51□□□□□ -1.69
TFA1YKL028W VPS38Q05919 439 aa4.51□□□□□ -1.69
TFA1YKL028W NOP6Q07623 225 aaKnown RBP4.51□□□□□ -1.69
TFA1YKL028W YPL272CQ08984 517 aa4.51□□□□□ -1.69
TFA1YKL028W SEC39Q12745 709 aa4.51□□□□□ -1.69
TFA1YKL028W PNO1Q99216 274 aaKnown RBP4.51□□□□□ -1.69
TFA1YKL028W YOR019WQ99248 730 aa4.51□□□□□ -1.69
TFA1YKL028W CHD1P32657 1468 aa4.51□□□□□ -1.69
TFA1YKL028W SAC3P46674 1301 aa4.5□□□□□ -1.69
TFA1YKL028W DAP2P18962 818 aa4.5□□□□□ -1.69
TFA1YKL028W PRP4P20053 465 aaKnown RBP4.5□□□□□ -1.69
TFA1YKL028W VPS33P20795 691 aa4.5□□□□□ -1.69
TFA1YKL028W STE11P23561 717 aa4.5□□□□□ -1.69
TFA1YKL028W RRP43P25359 394 aaPredicted RBP4.5□□□□□ -1.69
TFA1YKL028W CDC20P26309 610 aa4.5□□□□□ -1.69
TFA1YKL028W URK1P27515 501 aa4.5□□□□□ -1.69
TFA1YKL028W BUD14P27637 709 aa4.5□□□□□ -1.69
TFA1YKL028W DCG1P32460 244 aa4.5□□□□□ -1.69
TFA1YKL028W SEF1P34228 1148 aa4.5□□□□□ -1.69
TFA1YKL028W CMC1P36064 111 aa4.5□□□□□ -1.69
TFA1YKL028W RRT2P38332 387 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms