RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
UFD4YKL010C ICL2Q12031 575 aa2.18□□□□□ -2.06
UFD4YKL010C YLR149CQ99296 730 aa2.18□□□□□ -2.06
UFD4YKL010C FRT1Q99332 602 aa2.18□□□□□ -2.06
UFD4YKL010C RPP1AP05318 106 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C SSA1P10591 642 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C GCD2P12754 651 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C PDC5P16467 563 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C ACO1P19414 778 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
UFD4YKL010C TYR1P20049 452 aa2.17□□□□□ -2.06
UFD4YKL010C SAN1P22470 610 aa2.17□□□□□ -2.06
UFD4YKL010C FPS1P23900 669 aa2.17□□□□□ -2.06
UFD4YKL010C RAD51P25454 400 aa2.17□□□□□ -2.06
UFD4YKL010C MGT1P26188 188 aa2.17□□□□□ -2.06
UFD4YKL010C SPR1P32603 445 aa2.17□□□□□ -2.06
UFD4YKL010C APM3P38153 483 aa2.17□□□□□ -2.06
UFD4YKL010C YBR053CP38235 358 aa2.17□□□□□ -2.06
UFD4YKL010C SLX1P38324 304 aa2.17□□□□□ -2.06
UFD4YKL010C MSC7P38694 644 aa2.17□□□□□ -2.06
UFD4YKL010C HSE1P38753 452 aa2.17□□□□□ -2.06
UFD4YKL010C DLD2P46681 530 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C CEG1Q01159 459 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C YPL014WQ02606 381 aa2.17□□□□□ -2.06
UFD4YKL010C YDR239CQ03780 787 aa2.17□□□□□ -2.06
UFD4YKL010C ADY3Q07732 790 aa2.17□□□□□ -2.06
UFD4YKL010C YEH2Q07950 538 aa2.17□□□□□ -2.06
UFD4YKL010C GAL80P04387 435 aa2.17□□□□□ -2.06
UFD4YKL010C FAR1P21268 830 aa2.17□□□□□ -2.06
UFD4YKL010C PWP1P21304 576 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C GID7P25569 745 aa2.17□□□□□ -2.06
UFD4YKL010C ZUO1P32527 433 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C MRPL16P38064 232 aa2.17□□□□□ -2.06
UFD4YKL010C ROT2P38138 954 aa2.17□□□□□ -2.06
UFD4YKL010C IST2P38250 946 aa2.17□□□□□ -2.06
UFD4YKL010C GND1P38720 489 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C YHL026CP38740 315 aa2.17□□□□□ -2.06
UFD4YKL010C HAT2P39984 401 aa2.17□□□□□ -2.06
UFD4YKL010C GPI8P49018 411 aa2.17□□□□□ -2.06
UFD4YKL010C MET13P53128 600 aa2.17□□□□□ -2.06
UFD4YKL010C CLD1P53264 445 aa2.17□□□□□ -2.06
UFD4YKL010C MMT1Q03218 510 aa2.17□□□□□ -2.06
UFD4YKL010C ERB1Q04660 807 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C SSQ1Q05931 657 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C NSL1Q12143 216 aa2.17□□□□□ -2.06
UFD4YKL010C CMD1P06787 147 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C ATR1P13090 542 aa2.17□□□□□ -2.06
UFD4YKL010C HSP26P15992 214 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06 RIP-Chip
UFD4YKL010C REC107P21651 314 aa2.17□□□□□ -2.06
UFD4YKL010C ATP12P22135 325 aa2.17□□□□□ -2.06
UFD4YKL010C YCK2P23292 546 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C STE14P32584 239 aa2.17□□□□□ -2.06
UFD4YKL010C GDA1P32621 518 aa2.17□□□□□ -2.06
UFD4YKL010C TOA1P32773 286 aa2.17□□□□□ -2.06
UFD4YKL010C CYM1P32898 989 aa2.17□□□□□ -2.06
UFD4YKL010C RPS1AP33442 255 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C APN2P38207 520 aa2.17□□□□□ -2.06
UFD4YKL010C BSD2P38356 321 aa2.17□□□□□ -2.06
UFD4YKL010C YHR033WP38690 423 aa2.17□□□□□ -2.06
UFD4YKL010C PEX18P38855 283 aa2.17□□□□□ -2.06
UFD4YKL010C MTG2P38860 518 aa2.17□□□□□ -2.06
UFD4YKL010C YDR089WP38966 869 aa2.17□□□□□ -2.06
UFD4YKL010C NUP60P39705 539 aa2.17□□□□□ -2.06
UFD4YKL010C SET2P46995 733 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C YNL011CP53980 444 aa2.17□□□□□ -2.06
UFD4YKL010C PRO2P54885 456 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C STP1Q00947 519 aa2.17□□□□□ -2.06
UFD4YKL010C TOF2Q02208 771 aa2.17□□□□□ -2.06
UFD4YKL010C RCF1Q03713 159 aa2.17□□□□□ -2.06
UFD4YKL010C HFD1Q04458 532 aa2.17□□□□□ -2.06
UFD4YKL010C YMR111CQ04461 462 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C ENT4Q07872 247 aa2.17□□□□□ -2.06
UFD4YKL010C APM4Q99186 491 aa2.17□□□□□ -2.06
UFD4YKL010C JIP3O13555 125 aa2.17□□□□□ -2.06
UFD4YKL010C CBP2P03874 630 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C YME2P32843 850 aa2.17□□□□□ -2.06
UFD4YKL010C AIM26P32858 118 aa2.17□□□□□ -2.06
UFD4YKL010C CAF4P36130 643 aa2.17□□□□□ -2.06
UFD4YKL010C CRP1P38845 465 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C SOP4P39543 234 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C IST3P40565 148 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C RTT101P47050 842 aa2.17□□□□□ -2.06
UFD4YKL010C RPS7BP48164 190 aaKnown RBP2.17□□□□□ -2.06
UFD4YKL010C MRM2P53123 320 aa2.17□□□□□ -2.06
UFD4YKL010C MSC2Q03455 724 aa2.17□□□□□ -2.06
UFD4YKL010C BLS1Q06071 122 aa2.17□□□□□ -2.06
UFD4YKL010C PEX15Q08215 383 aa2.17□□□□□ -2.06
UFD4YKL010C DNL4Q08387 944 aaPredicted RBP2.17□□□□□ -2.06
UFD4YKL010C THI21Q08975 551 aa2.17□□□□□ -2.06
UFD4YKL010C YDR215CQ12240 137 aa2.17□□□□□ -2.06
UFD4YKL010C AI5_ALPHAQ9ZZX1 630 aa2.17□□□□□ -2.06
UFD4YKL010C YPR096CO13587 100 aa2.16□□□□□ -2.06
UFD4YKL010C DMC1P25453 334 aa2.16□□□□□ -2.06
UFD4YKL010C ATP7P30902 174 aa2.16□□□□□ -2.06
UFD4YKL010C RRN6P32786 894 aa2.16□□□□□ -2.06
UFD4YKL010C MRPL6P32904 214 aa2.16□□□□□ -2.06
UFD4YKL010C RRP14P36080 434 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C APE3P37302 537 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C BZZ1P38822 633 aa2.16□□□□□ -2.06
UFD4YKL010C YEN1P40028 759 aa2.16□□□□□ -2.06
UFD4YKL010C PRE6P40303 254 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms