RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF6, Length 999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF6	YHL025W	DOT6	P40059	670 aa	Known RBP	11.35	□□□□□ -0.59
SNF6	YHL025W	COG1	P53079	417 aa		11.35	□□□□□ -0.59
SNF6	YHL025W	SFB2	P53953	876 aa		11.35	□□□□□ -0.59
SNF6	YHL025W	YPR114W	Q06107	315 aa		11.35	□□□□□ -0.59
SNF6	YHL025W	MCP2	Q06567	569 aa		11.35	□□□□□ -0.59
SNF6	YHL025W	GLN4	P13188	809 aa	Known RBP	11.34	□□□□□ -0.59
SNF6	YHL025W	NSP1	P14907	823 aa	Known RBP	11.34	□□□□□ -0.59
SNF6	YHL025W	MNE1	P24720	663 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	CLB1	P24868	471 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	MAP2	P38174	421 aa	Known RBP	11.34	□□□□□ -0.59
SNF6	YHL025W	PAN6	P40459	309 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	CHS6	P40955	746 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	ERG10	P41338	398 aa	Known RBP	11.34	□□□□□ -0.59
SNF6	YHL025W	GYP8	P43570	497 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	PRM1	P53835	661 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	YDR132C	Q03900	495 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	YPT6	Q99260	215 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	FRT1	Q99332	602 aa		11.34	□□□□□ -0.59
SNF6	YHL025W	RPS14A	P06367	137 aa	Known RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	PRP16	P15938	1071 aa	Predicted RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	PMA2	P19657	947 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	BAS1	P22035	811 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	SCD5	P34758	872 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	RPS14B	P39516	138 aa	Known RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	HAT2	P39984	401 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	RPL34B	P40525	121 aa	Known RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	ATH1	P48016	1211 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	PYK2	P52489	506 aa	Known RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	FLC3	P53121	802 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	YNR065C	P53751	1116 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	SPP2	Q02521	185 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	YMR102C	Q03177	834 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	YHM2	Q04013	314 aa		11.33	□□□□□ -0.6
SNF6	YHL025W	HPT1	Q04178	221 aa	Known RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	CHS5	Q12114	671 aa	Known RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	NOT5	Q12514	560 aa	Predicted RBP	11.33	□□□□□ -0.6
SNF6	YHL025W	RPS9A	O13516	197 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	TRX2	P22803	104 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	RPC19	P28000	142 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	GUT2	P32191	649 aa		11.32	□□□□□ -0.6
SNF6	YHL025W	SWE1	P32944	819 aa		11.32	□□□□□ -0.6
SNF6	YHL025W	LDB7	P38210	180 aa		11.32	□□□□□ -0.6
SNF6	YHL025W	SRP72	P38688	640 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	TES1	P41903	349 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	CSN12	P47130	423 aa		11.32	□□□□□ -0.6
SNF6	YHL025W	TEL2	P53038	688 aa		11.32	□□□□□ -0.6
SNF6	YHL025W	IMP4	P53941	290 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	RNY1	Q02933	434 aa	Known RBP	11.32	□□□□□ -0.6
SNF6	YHL025W	NUT2	Q06213	157 aa		11.32	□□□□□ -0.6
SNF6	YHL025W	STE2	D6VTK4	431 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	AMD1	P15274	810 aa	Known RBP	11.31	□□□□□ -0.6
SNF6	YHL025W	YSC84	P32793	468 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	GND1	P38720	489 aa	Known RBP	11.31	□□□□□ -0.6
SNF6	YHL025W	NEM1	P38757	446 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	ACO2	P39533	789 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	ALG8	P40351	577 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	MAD3	P47074	515 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	YJR124C	P47159	448 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	VEL1	P53058	206 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	SPC105	P53148	917 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	TVP15	Q03860	143 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	CSN9	Q03981	162 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	LCB5	Q06147	687 aa	Known RBP	11.31	□□□□□ -0.6
SNF6	YHL025W	NUS1	Q12063	375 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	PER33	Q12144	273 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	MEX67	Q99257	599 aa	Known RBP	11.31	□□□□□ -0.6
SNF6	YHL025W	YOR338W	Q99326	363 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	TEL1	P38110	2787 aa		11.31	□□□□□ -0.6
SNF6	YHL025W	IRA2	P19158	3079 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	ABF1	P14164	731 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	YCR099C	P25657	155 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	PYC2	P32327	1180 aa	Known RBP	11.3	□□□□□ -0.6
SNF6	YHL025W	MF(ALPHA)2	P32435	120 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	PXA2	P34230	853 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	MED6	P38782	295 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	YDR089W	P38966	869 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	PET130	P47065	347 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	MNT2	P53059	558 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	YNL143C	P53908	130 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	YDR131C	Q03899	556 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	MFB1	Q04922	465 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	RSB1	Q08417	382 aa		11.3	□□□□□ -0.6
SNF6	YHL025W	HRK1	Q08732	759 aa	Known RBP	11.3	□□□□□ -0.6
SNF6	YHL025W	LEU1	P07264	779 aa	Known RBP	11.29	□□□□□ -0.6
SNF6	YHL025W	TFC3	P34111	1160 aa		11.29	□□□□□ -0.6
SNF6	YHL025W	RRN3	P36070	627 aa		11.29	□□□□□ -0.6
SNF6	YHL025W	AXL1	P40851	1208 aa		11.29	□□□□□ -0.6
SNF6	YHL025W	BOL2	P53082	120 aa		11.29	□□□□□ -0.6
SNF6	YHL025W	YMR155W	Q03795	547 aa		11.29	□□□□□ -0.6
SNF6	YHL025W	TMA46	Q12000	345 aa	Known RBP	11.29	□□□□□ -0.6
SNF6	YHL025W	COX6	P00427	148 aa		11.28	□□□□□ -0.6
SNF6	YHL025W	RHO2	P06781	192 aa		11.28	□□□□□ -0.6
SNF6	YHL025W	FUS1	P11710	512 aa		11.28	□□□□□ -0.6
SNF6	YHL025W	HSC82	P15108	705 aa	Known RBP	11.28	□□□□□ -0.6
SNF6	YHL025W	PRP4	P20053	465 aa	Known RBP	11.28	□□□□□ -0.6
SNF6	YHL025W	FPR1	P20081	114 aa	Known RBP	11.28	□□□□□ -0.6
SNF6	YHL025W	VAC17	P25591	423 aa		11.28	□□□□□ -0.6
SNF6	YHL025W	ASK1	P35734	292 aa		11.28	□□□□□ -0.6
SNF6	YHL025W	PHO11	P35842	467 aa		11.28	□□□□□ -0.6
SNF6	YHL025W	STB6	P36085	766 aa		11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 1491 ms