RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W NUR1Q12066 484 aa4.33□□□□□ -1.72
LSB1YGR136W RUD3Q12234 484 aaKnown RBP4.33□□□□□ -1.72
LSB1YGR136W RIB2Q12362 591 aaKnown RBP4.33□□□□□ -1.72
LSB1YGR136W PCD1Q12524 340 aa4.33□□□□□ -1.72
LSB1YGR136W ADE4P04046 510 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W CDC33P07260 213 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W GFA1P14742 717 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W ADE2P21264 571 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W PAP1P29468 568 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W HEM12P32347 362 aaPredicted RBP4.32□□□□□ -1.72
LSB1YGR136W SRP101P32916 621 aa4.32□□□□□ -1.72
LSB1YGR136W UBC6P33296 250 aaPredicted RBP4.32□□□□□ -1.72
LSB1YGR136W CSE2P33308 149 aa4.32□□□□□ -1.72
LSB1YGR136W YKL050CP35736 922 aa4.32□□□□□ -1.72
LSB1YGR136W MRX3P38172 270 aa4.32□□□□□ -1.72
LSB1YGR136W APN2P38207 520 aa4.32□□□□□ -1.72
LSB1YGR136W YHL026CP38740 315 aa4.32□□□□□ -1.72
LSB1YGR136W CTF8P38877 133 aa4.32□□□□□ -1.72
LSB1YGR136W ZRG8P40021 1076 aa4.32□□□□□ -1.72
LSB1YGR136W FTR1P40088 404 aa4.32□□□□□ -1.72
LSB1YGR136W ESL1P40456 1118 aa4.32□□□□□ -1.72
LSB1YGR136W YIL108WP40483 696 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W SCD6P45978 349 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
LSB1YGR136W YJR039WP47107 1121 aa4.32□□□□□ -1.72
LSB1YGR136W ILM1P47155 203 aa4.32□□□□□ -1.72
LSB1YGR136W PCL10P53124 433 aa4.32□□□□□ -1.72
LSB1YGR136W SPC105P53148 917 aa4.32□□□□□ -1.72
LSB1YGR136W MNP1P53163 194 aaPredicted RBP4.32□□□□□ -1.72
LSB1YGR136W YNL034WP53963 612 aa4.32□□□□□ -1.72
LSB1YGR136W YNL018CP53976 612 aa4.32□□□□□ -1.72
LSB1YGR136W RPA49Q01080 415 aaPredicted RBP4.32□□□□□ -1.72
LSB1YGR136W MET14Q02196 202 aa4.32□□□□□ -1.72
LSB1YGR136W ATG16Q03818 150 aa4.32□□□□□ -1.72
LSB1YGR136W YMR114CQ04471 368 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W YLR455WQ06188 304 aa4.32□□□□□ -1.72
LSB1YGR136W ECM7Q06200 448 aa4.32□□□□□ -1.72
LSB1YGR136W MLC2Q06580 163 aa4.32□□□□□ -1.72
LSB1YGR136W SHS1Q07657 551 aa4.32□□□□□ -1.72
LSB1YGR136W RIO1Q12196 484 aaKnown RBP4.32□□□□□ -1.72
LSB1YGR136W YOR022CQ12204 715 aa4.32□□□□□ -1.72
LSB1YGR136W ZRT2Q12436 422 aa4.32□□□□□ -1.72
LSB1YGR136W ZPS1Q12512 249 aa4.32□□□□□ -1.72
LSB1YGR136W RPS3P05750 240 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W SPE1P08432 466 aa4.31□□□□□ -1.72
LSB1YGR136W ERG11P10614 530 aa4.31□□□□□ -1.72
LSB1YGR136W NAT1P12945 854 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W PMR1P13586 950 aa4.31□□□□□ -1.72
LSB1YGR136W COX11P19516 300 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W RPL5P26321 297 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W PDB1P32473 366 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W GCG1P32656 232 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W TFC3P34111 1160 aa4.31□□□□□ -1.72
LSB1YGR136W OAF3P36023 863 aa4.31□□□□□ -1.72
LSB1YGR136W YKR051WP36142 418 aa4.31□□□□□ -1.72
LSB1YGR136W MRPL7P36519 292 aa4.31□□□□□ -1.72
LSB1YGR136W SLX1P38324 304 aa4.31□□□□□ -1.72
LSB1YGR136W HIS2P38635 335 aa4.31□□□□□ -1.72
LSB1YGR136W SAK1P38990 1142 aa4.31□□□□□ -1.72
LSB1YGR136W HXT6P39003 570 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W HXT7P39004 570 aa4.31□□□□□ -1.72
LSB1YGR136W FMP10P40098 244 aa4.31□□□□□ -1.72
LSB1YGR136W YTA12P40341 825 aa4.31□□□□□ -1.72
LSB1YGR136W MND2P40577 368 aa4.31□□□□□ -1.72
LSB1YGR136W OPT1P40897 799 aa4.31□□□□□ -1.72
LSB1YGR136W ASN1P49089 572 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W RNR4P49723 345 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W HSH155P49955 971 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W UBC9P50623 157 aaPredicted RBP4.31□□□□□ -1.72
LSB1YGR136W ORC5P50874 479 aa4.31□□□□□ -1.72
LSB1YGR136W GPD1Q00055 391 aaKnown RBP4.31□□□□□ -1.72
LSB1YGR136W PNG1Q02890 363 aa4.31□□□□□ -1.72
LSB1YGR136W TRS130Q03660 1102 aa4.31□□□□□ -1.72
LSB1YGR136W URH1Q04179 340 aa4.31□□□□□ -1.72
LSB1YGR136W CRR1Q05790 422 aa4.31□□□□□ -1.72
LSB1YGR136W SFH1Q06168 426 aa4.31□□□□□ -1.72
LSB1YGR136W SIL1Q08199 421 aa4.31□□□□□ -1.72
LSB1YGR136W YPR027CQ12079 277 aa4.31□□□□□ -1.72
LSB1YGR136W HAL9Q12180 1030 aa4.31□□□□□ -1.72
LSB1YGR136W GLN3P18494 730 aa4.3□□□□□ -1.72
LSB1YGR136W CLN1P20437 546 aa4.3□□□□□ -1.72
LSB1YGR136W CLB4P24871 460 aa4.3□□□□□ -1.72
LSB1YGR136W RSA4P25382 515 aaKnown RBP4.3□□□□□ -1.72
LSB1YGR136W ADK2P26364 225 aa4.3□□□□□ -1.72
LSB1YGR136W BUD14P27637 709 aa4.3□□□□□ -1.72
LSB1YGR136W PRR1P28708 518 aa4.3□□□□□ -1.72
LSB1YGR136W FUI1P38196 639 aa4.3□□□□□ -1.72
LSB1YGR136W MMS4P38257 691 aa4.3□□□□□ -1.72
LSB1YGR136W MPT5P39016 859 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
LSB1YGR136W AIM20P40451 204 aa4.3□□□□□ -1.72
LSB1YGR136W SDP1P40479 209 aa4.3□□□□□ -1.72
LSB1YGR136W URM1P40554 99 aaPredicted RBP4.3□□□□□ -1.72
LSB1YGR136W YRB1P41920 201 aaKnown RBP4.3□□□□□ -1.72
LSB1YGR136W MIC19P43594 170 aa4.3□□□□□ -1.72
LSB1YGR136W YGR111WP53265 400 aa4.3□□□□□ -1.72
LSB1YGR136W ALG11P53954 548 aaKnown RBP4.3□□□□□ -1.72
LSB1YGR136W ASI1P54074 624 aa4.3□□□□□ -1.72
LSB1YGR136W CWC21Q03375 135 aaKnown RBP4.3□□□□□ -1.72
LSB1YGR136W YHM2Q04013 314 aa4.3□□□□□ -1.72
LSB1YGR136W ECI1Q05871 280 aa4.3□□□□□ -1.72
LSB1YGR136W IWR1Q07532 353 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 148 ms