RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C TAH18Q12181 623 aa3.23□□□□□ -1.89
MSH4YFL003C SCC2Q04002 1493 aa3.23□□□□□ -1.89
MSH4YFL003C YLR302CO13544 120 aa3.23□□□□□ -1.89
MSH4YFL003C GSH1P32477 678 aa3.23□□□□□ -1.89
MSH4YFL003C SAC6P32599 642 aaKnown RBP3.23□□□□□ -1.89
MSH4YFL003C VMA8P32610 256 aaKnown RBP3.23□□□□□ -1.89
MSH4YFL003C SGN1P40561 250 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
MSH4YFL003C YPL071CQ02864 156 aa3.23□□□□□ -1.89
MSH4YFL003C PUS9Q12069 462 aa3.23□□□□□ -1.89
MSH4YFL003C HSH49Q99181 213 aaPredicted RBP3.23□□□□□ -1.89
MSH4YFL003C ISN1Q99312 450 aa3.23□□□□□ -1.89
MSH4YFL003C MET17P06106 444 aa3.22□□□□□ -1.89
MSH4YFL003C PMA2P19657 947 aa3.22□□□□□ -1.89
MSH4YFL003C ROX1P25042 368 aa3.22□□□□□ -1.89
MSH4YFL003C SRB5P32585 307 aa3.22□□□□□ -1.89
MSH4YFL003C MRPL36P36531 177 aa3.22□□□□□ -1.89
MSH4YFL003C LTP1P40347 161 aa3.22□□□□□ -1.89
MSH4YFL003C PFK26P40433 827 aaKnown RBP3.22□□□□□ -1.89
MSH4YFL003C SEC24P40482 926 aaKnown RBP3.22□□□□□ -1.89
MSH4YFL003C SPO22P40511 975 aa3.22□□□□□ -1.89
MSH4YFL003C IME4P41833 600 aa3.22□□□□□ -1.89
MSH4YFL003C GPD2P41911 440 aaKnown RBP3.22□□□□□ -1.89
MSH4YFL003C YOL159C-AQ3E769 90 aa3.22□□□□□ -1.89
MSH4YFL003C PDR15Q04182 1529 aaKnown RBP3.22□□□□□ -1.89
MSH4YFL003C VPS15P22219 1454 aa3.22□□□□□ -1.89
MSH4YFL003C SEC3P33332 1336 aaKnown RBP3.22□□□□□ -1.89
MSH4YFL003C MAK32P23060 363 aa3.22□□□□□ -1.89
MSH4YFL003C PGS1P25578 521 aa3.22□□□□□ -1.89
MSH4YFL003C ARP1P38696 384 aa3.22□□□□□ -1.89
MSH4YFL003C BDH2P39713 417 aa3.22□□□□□ -1.89
MSH4YFL003C GIP4P39732 760 aa3.22□□□□□ -1.89
MSH4YFL003C CDC1P40986 491 aa3.22□□□□□ -1.89
MSH4YFL003C ASE1P50275 885 aa3.22□□□□□ -1.89
MSH4YFL003C COQ6P53318 479 aa3.22□□□□□ -1.89
MSH4YFL003C RAD34Q06665 692 aa3.22□□□□□ -1.89
MSH4YFL003C SKI3P17883 1432 aaKnown RBP3.21□□□□□ -1.9
MSH4YFL003C CDC24P11433 854 aaPredicted RBP3.21□□□□□ -1.9
MSH4YFL003C ABF1P14164 731 aa3.21□□□□□ -1.9
MSH4YFL003C KRS1P15180 591 aaKnown RBP3.21□□□□□ -1.9
MSH4YFL003C SYN8P31377 255 aa3.21□□□□□ -1.9
MSH4YFL003C GLG1P36143 616 aa3.21□□□□□ -1.9
MSH4YFL003C MUM2P38236 366 aa3.21□□□□□ -1.9
MSH4YFL003C CBR1P38626 284 aaKnown RBP3.21□□□□□ -1.9
MSH4YFL003C APE4P38821 490 aa3.21□□□□□ -1.9
MSH4YFL003C ASN1P49089 572 aaKnown RBP3.21□□□□□ -1.9
MSH4YFL003C LCL3P53153 274 aa3.21□□□□□ -1.9
MSH4YFL003C MEH1Q02205 184 aa3.21□□□□□ -1.9
MSH4YFL003C RCF1Q03713 159 aa3.21□□□□□ -1.9
MSH4YFL003C GIS1Q03833 894 aa3.21□□□□□ -1.9
MSH4YFL003C YML053CQ04978 212 aa3.21□□□□□ -1.9
MSH4YFL003C CTI6Q08923 506 aa3.21□□□□□ -1.9
MSH4YFL003C GRX6Q12438 231 aa3.21□□□□□ -1.9
MSH4YFL003C ARG3P05150 338 aa3.21□□□□□ -1.9
MSH4YFL003C PFK2P16862 959 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
MSH4YFL003C KGD1P20967 1014 aaKnown RBP3.21□□□□□ -1.9
MSH4YFL003C YMC1P32331 307 aa3.21□□□□□ -1.9
MSH4YFL003C ECM32P32644 1121 aaKnown RBP3.21□□□□□ -1.9
MSH4YFL003C SRO77P38163 1010 aa3.21□□□□□ -1.9
MSH4YFL003C MSE1P48525 536 aa3.21□□□□□ -1.9
MSH4YFL003C YPR003CP53394 754 aa3.21□□□□□ -1.9
MSH4YFL003C YDR131CQ03899 556 aa3.21□□□□□ -1.9
MSH4YFL003C ATG23Q06671 453 aa3.21□□□□□ -1.9
MSH4YFL003C ATG9Q12142 997 aa3.21□□□□□ -1.9
MSH4YFL003C RRG1Q12167 365 aaPredicted RBP3.21□□□□□ -1.9
MSH4YFL003C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
MSH4YFL003C TY2B-BQ12491 1770 aa3.2□□□□□ -1.9
MSH4YFL003C DOP1Q03921 1698 aa3.2□□□□□ -1.9
MSH4YFL003C FUR1P18562 216 aaKnown RBP3.2□□□□□ -1.9
MSH4YFL003C POL4P25615 582 aa3.2□□□□□ -1.9
MSH4YFL003C MOH1P38191 138 aa3.2□□□□□ -1.9
MSH4YFL003C FLC2P39719 783 aa3.2□□□□□ -1.9
MSH4YFL003C SAP1P39955 897 aaKnown RBP3.2□□□□□ -1.9
MSH4YFL003C ARG2P40360 574 aa3.2□□□□□ -1.9
MSH4YFL003C YML6P51998 286 aa3.2□□□□□ -1.9
MSH4YFL003C NRD1P53617 575 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
MSH4YFL003C ADE16P54113 591 aaKnown RBP3.2□□□□□ -1.9
MSH4YFL003C INA17Q02888 182 aa3.2□□□□□ -1.9
MSH4YFL003C SYF1Q04048 859 aaPredicted RBP3.2□□□□□ -1.9
MSH4YFL003C TMN2Q04562 672 aa3.2□□□□□ -1.9
MSH4YFL003C YPL216WQ08964 1102 aa3.2□□□□□ -1.9
MSH4YFL003C ZPS1Q12512 249 aa3.2□□□□□ -1.9
MSH4YFL003C CHO1P08456 276 aa3.2□□□□□ -1.9
MSH4YFL003C PET111P08468 800 aa3.2□□□□□ -1.9
MSH4YFL003C PDE1P22434 369 aa3.2□□□□□ -1.9
MSH4YFL003C ORC2P32833 620 aa3.2□□□□□ -1.9
MSH4YFL003C PXA2P34230 853 aa3.2□□□□□ -1.9
MSH4YFL003C AUR1P36107 401 aaPredicted RBP3.2□□□□□ -1.9
MSH4YFL003C RGI2P40188 164 aa3.2□□□□□ -1.9
MSH4YFL003C CRN1Q06440 651 aa3.2□□□□□ -1.9
MSH4YFL003C MRH1Q12117 320 aaPredicted RBP3.2□□□□□ -1.9
MSH4YFL003C WHI2P12611 486 aa3.19□□□□□ -1.9
MSH4YFL003C CKA1P15790 372 aa3.19□□□□□ -1.9
MSH4YFL003C MTH1P35198 433 aa3.19□□□□□ -1.9
MSH4YFL003C IMD2P38697 523 aaKnown RBP3.19□□□□□ -1.9
MSH4YFL003C ERV46P39727 415 aa3.19□□□□□ -1.9
MSH4YFL003C SAE2P46946 345 aa3.19□□□□□ -1.9
MSH4YFL003C IMD3P50095 523 aaKnown RBP3.19□□□□□ -1.9
MSH4YFL003C YLR345WQ06137 509 aa3.19□□□□□ -1.9
MSH4YFL003C SWA2Q06677 668 aa3.19□□□□□ -1.9
MSH4YFL003C ACF2Q12168 779 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms