RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	PRE8	P23639	250 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	PEX2	P32800	271 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	LHS1	P36016	881 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	SEC31	P38968	1273 aa	Known RBP	4.24	□□□□□ -1.73
RPN4	YDL020C	ERV46	P39727	415 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	MRX1	P40050	688 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	SEC24	P40482	926 aa	Known RBP	4.24	□□□□□ -1.73
RPN4	YDL020C	CIN1	P40987	1014 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	ATP23	P53722	227 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	TPO3	Q06451	622 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	MED1	Q12321	566 aa		4.24	□□□□□ -1.73
RPN4	YDL020C	SOF1	P33750	489 aa	Known RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	ADE17	P38009	592 aa	Known RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	UBP13	P38187	747 aa		4.23	□□□□□ -1.73
RPN4	YDL020C	BPL1	P48445	690 aa	Predicted RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	DUO1	P53168	247 aa	Known RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	RSM28	Q03430	361 aa		4.23	□□□□□ -1.73
RPN4	YDL020C	SNU56	Q03782	492 aa	Known RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	SKG3	Q06315	1026 aa		4.23	□□□□□ -1.73
RPN4	YDL020C	RIX7	Q07844	837 aa	Known RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	YGL036W	P53185	909 aa	Predicted RBP	4.23	□□□□□ -1.73
RPN4	YDL020C	IRC3	Q06683	689 aa		4.23	□□□□□ -1.73
RPN4	YDL020C	YBR126W-A	Q8TGU7	68 aa		4.23	□□□□□ -1.73
RPN4	YDL020C	ILS1	P09436	1072 aa	Known RBP	4.22	□□□□□ -1.73
RPN4	YDL020C	MSS51	P32335	436 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	RTS1	P38903	757 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	ECM10	P39987	644 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	JHD1	P40034	492 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	CDC1	P40986	491 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	ORC5	P50874	479 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	ORM2	Q06144	216 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	IMH1	Q06704	911 aa	Known RBP	4.22	□□□□□ -1.73
RPN4	YDL020C	HUA2	Q12134	243 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	FRE7	Q12333	620 aa		4.22	□□□□□ -1.73
RPN4	YDL020C	PET111	P08468	800 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	MRP2	P10663	115 aa	Predicted RBP	4.21	□□□□□ -1.74
RPN4	YDL020C	NUP1	P20676	1076 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	YCK1	P23291	538 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	MBR1	P23493	339 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	SAC6	P32599	642 aa	Known RBP	4.21	□□□□□ -1.74
RPN4	YDL020C	ORC2	P32833	620 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	CUE2	P36075	443 aa	Known RBP	4.21	□□□□□ -1.74
RPN4	YDL020C	YBL029W	P38201	376 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	RPN11	P43588	306 aa	Known RBP	4.21	□□□□□ -1.74
RPN4	YDL020C	INA17	Q02888	182 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	NDJ1	Q12366	352 aa		4.21	□□□□□ -1.74
RPN4	YDL020C	APN1	P22936	367 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	URE2	P23202	354 aa	Known RBP	4.2	□□□□□ -1.74
RPN4	YDL020C	MAL33	P38157	468 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	NDE1	P40215	560 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	IRC7	P43623	340 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	CTK2	P46962	323 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	TCO89	Q08921	799 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	TAD3	Q9URQ3	322 aa		4.2	□□□□□ -1.74
RPN4	YDL020C	HXK2	P04807	486 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	NOP4	P37838	685 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	ATF1	P40353	525 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	YFR020W	P43600	232 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	NMD5	P46970	1048 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	IST1	P53843	298 aa	Predicted RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	PSR1	Q07800	427 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	SDH5	Q08230	162 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	RTP1	Q12751	981 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	YNL162W-A	Q3E7A8	72 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	PGK1	P00560	416 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	SEC53	P07283	254 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	MET8	P15807	274 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	KAR3	P17119	729 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	YCR006C	P25350	157 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	SGF29	P25554	259 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	PDB1	P32473	366 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	ARN1	P38731	627 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	YNG2	P38806	282 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	LYS4	P49367	693 aa	Predicted RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	MDM1	Q01846	1127 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	NGL3	Q03210	505 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	COQ11	Q05892	277 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	PDR8	Q06149	701 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	YLR455W	Q06188	304 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	TSR2	Q06672	205 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	YLR049C	Q12110	428 aa		4.19	□□□□□ -1.74
RPN4	YDL020C	NOP58	Q12499	511 aa	Known RBP	4.19	□□□□□ -1.74
RPN4	YDL020C	YER145C-A	A0A023PYF4	145 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	OLE1	P21147	510 aa	Known RBP	4.18	□□□□□ -1.74
RPN4	YDL020C	OCT1	P35999	772 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	AUR1	P36107	401 aa	Predicted RBP	4.18	□□□□□ -1.74
RPN4	YDL020C	BUR6	P40096	142 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	ESL1	P40456	1118 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	DPB11	P47027	764 aa	Predicted RBP	4.18	□□□□□ -1.74
RPN4	YDL020C	IDP3	P53982	420 aa	Known RBP	4.18	□□□□□ -1.74
RPN4	YDL020C	RSC9	Q03124	581 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	PFA5	Q03289	374 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	THI7	Q05998	598 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	MCH4	Q08268	501 aa		4.18	□□□□□ -1.74
RPN4	YDL020C	GET3	Q12154	354 aa	Known RBP	4.18	□□□□□ -1.74
RPN4	YDL020C	INH1	P01097	85 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	CHO1	P08456	276 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	GPA1	P08539	472 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	PWP1	P21304	576 aa	Known RBP	4.17	□□□□□ -1.74
RPN4	YDL020C	POL4	P25615	582 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms