RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W SET5P38890 526 aaKnown RBP5.88□□□□□ -1.47
SHP1YBL058W CEM1P39525 442 aa5.88□□□□□ -1.47
SHP1YBL058W FLC2P39719 783 aa5.88□□□□□ -1.47
SHP1YBL058W YAL037WP39728 267 aa5.88□□□□□ -1.47
SHP1YBL058W PTI1P39927 425 aaPredicted RBP5.88□□□□□ -1.47
SHP1YBL058W CFD1P40558 293 aa5.88□□□□□ -1.47
SHP1YBL058W TES1P41903 349 aaKnown RBP5.88□□□□□ -1.47
SHP1YBL058W ZIM17P42844 174 aa5.88□□□□□ -1.47
SHP1YBL058W YFR018CP43599 363 aa5.88□□□□□ -1.47
SHP1YBL058W STR3P53101 465 aaKnown RBP5.88□□□□□ -1.47
SHP1YBL058W YGL108CP53139 140 aa5.88□□□□□ -1.47
SHP1YBL058W YGR021WP53212 290 aa5.88□□□□□ -1.47
SHP1YBL058W GND2P53319 492 aa5.88□□□□□ -1.47
SHP1YBL058W NGL3Q03210 505 aa5.88□□□□□ -1.47
SHP1YBL058W ARP9Q05123 467 aa5.88□□□□□ -1.47
SHP1YBL058W LDB18Q07887 179 aa5.88□□□□□ -1.47
SHP1YBL058W PLB3Q08108 686 aa5.88□□□□□ -1.47
SHP1YBL058W ATG9Q12142 997 aa5.88□□□□□ -1.47
SHP1YBL058W FRT1Q99332 602 aa5.88□□□□□ -1.47
SHP1YBL058W CYT1P07143 309 aa5.87□□□□□ -1.47
SHP1YBL058W ACO1P19414 778 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SHP1YBL058W SFL1P20134 766 aa5.87□□□□□ -1.47
SHP1YBL058W SEC15P22224 910 aa5.87□□□□□ -1.47
SHP1YBL058W EMC1P25574 760 aa5.87□□□□□ -1.47
SHP1YBL058W RFA2P26754 273 aaKnown RBP5.87□□□□□ -1.47
SHP1YBL058W AEP1P32493 518 aa5.87□□□□□ -1.47
SHP1YBL058W PIM1P36775 1133 aa5.87□□□□□ -1.47
SHP1YBL058W IML3P38265 245 aa5.87□□□□□ -1.47
SHP1YBL058W YBR259WP38338 688 aa5.87□□□□□ -1.47
SHP1YBL058W SAW1P39735 261 aa5.87□□□□□ -1.47
SHP1YBL058W DLD3P39976 496 aaKnown RBP5.87□□□□□ -1.47
SHP1YBL058W BRO1P48582 844 aa5.87□□□□□ -1.47
SHP1YBL058W COG1P53079 417 aa5.87□□□□□ -1.47
SHP1YBL058W FRE4P53746 719 aa5.87□□□□□ -1.47
SHP1YBL058W VPS75P53853 264 aa5.87□□□□□ -1.47
SHP1YBL058W ATG16Q03818 150 aa5.87□□□□□ -1.47
SHP1YBL058W THI7Q05998 598 aa5.87□□□□□ -1.47
SHP1YBL058W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SHP1YBL058W AAD15Q08361 143 aa5.87□□□□□ -1.47
SHP1YBL058W TGL5Q12043 749 aa5.87□□□□□ -1.47
SHP1YBL058W RAD10P06838 210 aa5.86□□□□□ -1.47
SHP1YBL058W ERG11P10614 530 aa5.86□□□□□ -1.47
SHP1YBL058W APA1P16550 321 aaKnown RBP5.86□□□□□ -1.47
SHP1YBL058W CLN1P20437 546 aa5.86□□□□□ -1.47
SHP1YBL058W EPT1P22140 391 aa5.86□□□□□ -1.47
SHP1YBL058W SLY1P22213 666 aa5.86□□□□□ -1.47
SHP1YBL058W RNQ1P25367 405 aa5.86□□□□□ -1.47
SHP1YBL058W GAR1P28007 205 aaKnown RBP5.86□□□□□ -1.47
SHP1YBL058W NRP1P32770 719 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SHP1YBL058W TFC3P34111 1160 aa5.86□□□□□ -1.47
SHP1YBL058W BLI1P35727 113 aa5.86□□□□□ -1.47
SHP1YBL058W RRT2P38332 387 aa5.86□□□□□ -1.47
SHP1YBL058W SPC72P39723 622 aa5.86□□□□□ -1.47
SHP1YBL058W RGD2P43556 714 aa5.86□□□□□ -1.47
SHP1YBL058W TY4A-JP47023 414 aa5.86□□□□□ -1.47
SHP1YBL058W BIR1P47134 954 aa5.86□□□□□ -1.47
SHP1YBL058W SAP4P53036 818 aa5.86□□□□□ -1.47
SHP1YBL058W JJJ1P53863 590 aa5.86□□□□□ -1.47
SHP1YBL058W RSC4Q02206 625 aa5.86□□□□□ -1.47
SHP1YBL058W YMR160WQ03823 816 aa5.86□□□□□ -1.47
SHP1YBL058W EMI1Q04406 187 aa5.86□□□□□ -1.47
SHP1YBL058W DFG5Q05031 458 aa5.86□□□□□ -1.47
SHP1YBL058W CIA1Q05583 330 aa5.86□□□□□ -1.47
SHP1YBL058W STP3Q05937 343 aa5.86□□□□□ -1.47
SHP1YBL058W OPY2Q06810 360 aa5.86□□□□□ -1.47
SHP1YBL058W BDS1Q08347 646 aa5.86□□□□□ -1.47
SHP1YBL058W NEW1Q08972 1196 aaKnown RBP5.86□□□□□ -1.47
SHP1YBL058W MEC1P38111 2368 aa5.86□□□□□ -1.47
SHP1YBL058W SPS19P32573 292 aaKnown RBP5.85□□□□□ -1.47
SHP1YBL058W YBL055CP34220 418 aaPredicted RBP5.85□□□□□ -1.47
SHP1YBL058W ECM2P38241 364 aaKnown RBP5.85□□□□□ -1.47
SHP1YBL058W SMF1P38925 575 aa5.85□□□□□ -1.47
SHP1YBL058W YAT2P40017 923 aa5.85□□□□□ -1.47
SHP1YBL058W HST3P53687 447 aa5.85□□□□□ -1.47
SHP1YBL058W CDC14Q00684 551 aa5.85□□□□□ -1.47
SHP1YBL058W MET14Q02196 202 aa5.85□□□□□ -1.47
SHP1YBL058W HOS3Q02959 697 aaKnown RBP5.85□□□□□ -1.47
SHP1YBL058W ISU1Q03020 165 aa5.85□□□□□ -1.47
SHP1YBL058W YDR132CQ03900 495 aa5.85□□□□□ -1.47
SHP1YBL058W DIC1Q06143 298 aa5.85□□□□□ -1.47
SHP1YBL058W SMF3Q12078 473 aaPredicted RBP5.85□□□□□ -1.47
SHP1YBL058W YLR149CQ99296 730 aa5.85□□□□□ -1.47
SHP1YBL058W AI5_ALPHAQ9ZZX1 630 aa5.85□□□□□ -1.47
SHP1YBL058W STT4P37297 1900 aa5.84□□□□□ -1.47
SHP1YBL058W PLC1P32383 869 aa5.84□□□□□ -1.47
SHP1YBL058W RAD5P32849 1169 aaPredicted RBP5.84□□□□□ -1.47
SHP1YBL058W TAF14P35189 244 aa5.84□□□□□ -1.47
SHP1YBL058W GMH1P36125 273 aa5.84□□□□□ -1.47
SHP1YBL058W MRPL10P36520 322 aa5.84□□□□□ -1.47
SHP1YBL058W MRPL37P36532 105 aa5.84□□□□□ -1.47
SHP1YBL058W YBP1P38315 674 aa5.84□□□□□ -1.47
SHP1YBL058W PCL5P38794 229 aa5.84□□□□□ -1.47
SHP1YBL058W ERP5P38819 212 aa5.84□□□□□ -1.47
SHP1YBL058W CYC2P38909 366 aa5.84□□□□□ -1.47
SHP1YBL058W MND2P40577 368 aa5.84□□□□□ -1.47
SHP1YBL058W SIW14P53965 281 aa5.84□□□□□ -1.47
SHP1YBL058W SUR7P54003 302 aa5.84□□□□□ -1.47
SHP1YBL058W ERG5P54781 538 aa5.84□□□□□ -1.47
SHP1YBL058W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SHP1YBL058W DIG1Q03063 452 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms