RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLN3	YAL040C	TOK1	P40310	691 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	RIC1	P40395	1056 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	NDC80	P40460	691 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	IRC6	P43615	237 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	CPR7	P47103	393 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	PUS4	P48567	403 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	BRO1	P48582	844 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	STB4	P50104	949 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	YML6	P51998	286 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	HOS2	P53096	452 aa	Predicted RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	CEG1	Q01159	459 aa	Predicted RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	NSE5	Q03718	556 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	PPM1	Q04081	328 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	GYL1	Q04322	720 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	YMR114C	Q04471	368 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	YDR338C	Q05497	695 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	DON1	Q05610	365 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	CUR1	Q06469	252 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	SHS1	Q07657	551 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	PSR1	Q07800	427 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	HFI1	Q12060	488 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	YPR027C	Q12079	277 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	SEM1	O94742	89 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ADE8	P04161	214 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ALG7	P07286	448 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	SWI6	P09959	803 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	CDC42	P19073	191 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	RNR1	P21524	888 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	SAN1	P22470	610 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	MIH1	P23748	554 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	RRT12	P25381	491 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	CCR4	P31384	837 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	NGG1	P32494	702 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ECM32	P32644	1121 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	RGT1	P32862	1170 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	REC104	P33323	182 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	OAF3	P36023	863 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	TDA3	P38758	523 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	SMC2	P38989	1170 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	HXT6	P39003	570 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	HXT7	P39004	570 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	HMF1	P40037	129 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	KAP123	P40069	1113 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	SDS3	P40505	327 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	CEP3	P40969	608 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ASG7	P46993	209 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	AIM14	P53109	570 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	MNP1	P53163	194 aa	Predicted RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	ESBP6	P53918	673 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	VPS60	Q03390	229 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	NHX1	Q04121	633 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	URH1	Q04179	340 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ARA2	Q04212	335 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	TAF11	Q04226	346 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ECM38	Q05902	660 aa	Predicted RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	ATG23	Q06671	453 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	MET7	Q08645	548 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ENV7	Q12003	364 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	ARP7	Q12406	477 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	NOP58	Q12499	511 aa	Known RBP	2.39	□□□□□ -2.03
CLN3	YAL040C	ATG11	Q12527	1178 aa		2.39	□□□□□ -2.03
CLN3	YAL040C	UBR2	Q07963	1872 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	CDC33	P07260	213 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	PET111	P08468	800 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	MET3	P08536	511 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	MET8	P15807	274 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	CKI1	P20485	582 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	PRR1	P28708	518 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	GPI10	P30777	616 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	TMT1	P32643	299 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	GYP6	P32806	458 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	STE13	P33894	931 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	LTV1	P34078	463 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	DHR2	P36009	735 aa	Predicted RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	YRO2	P38079	344 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	CBR1	P38626	284 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	HIS2	P38635	335 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	LRP1	P38801	184 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	BUD16	P39988	312 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	LCP5	P40079	357 aa	Predicted RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	YTA12	P40341	825 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	SDP1	P40479	209 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	MKT1	P40850	830 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	SKP2	P42843	763 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	MIC19	P43594	170 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	NMD5	P46970	1048 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	GPI8	P49018	411 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	ZIP2	P53061	704 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	KAP114	P53067	1004 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	CUL3	P53202	744 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	BTN2	P53286	410 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	TEP1	P53916	434 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	YMR206W	Q03695	313 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	SNU56	Q03782	492 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	YKU80	Q04437	629 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	TDA9	Q04545	1251 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	RRP9	Q06506	573 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	CDD1	Q06549	142 aa		2.38	□□□□□ -2.03
CLN3	YAL040C	HBT1	Q07653	1046 aa	Known RBP	2.38	□□□□□ -2.03
CLN3	YAL040C	YPL191C	Q08930	360 aa		2.38	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 76.6 ms