RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 SOF1P33750 489 aaKnown RBP8.87□□□□□ -0.99
NME1NME1 SEC31P38968 1273 aaKnown RBP8.87□□□□□ -0.99
NME1NME1 SEC24P40482 926 aaKnown RBP8.87□□□□□ -0.99
NME1NME1 GPN2Q08726 347 aaPredicted RBP8.87□□□□□ -0.99
NME1NME1 TCO89Q08921 799 aa8.87□□□□□ -0.99
NME1NME1 RDL1Q12305 139 aaKnown RBP8.87□□□□□ -0.99
NME1NME1 GSH1P32477 678 aa8.86□□□□□ -0.99
NME1NME1 ARO10Q06408 635 aa8.86□□□□□ -0.99
NME1NME1 SPN1Q06505 410 aaPredicted RBP8.86□□□□□ -0.99
NME1NME1 NOP58Q12499 511 aaKnown RBP8.86□□□□□ -0.99
NME1NME1 CET1O13297 549 aaPredicted RBP8.85□□□□□ -0.99
NME1NME1 CDC31P06704 161 aaKnown RBP8.85□□□□□ -0.99
NME1NME1 SRP54P20424 541 aaKnown RBP8.85□□□□□ -0.99
NME1NME1 YCK1P23291 538 aa8.85□□□□□ -0.99
NME1NME1 SGF29P25554 259 aa8.85□□□□□ -0.99
NME1NME1 CMK1P27466 446 aaKnown RBP8.85□□□□□ -0.99
NME1NME1 JHD1P40034 492 aa8.85□□□□□ -0.99
NME1NME1 SRB7P47822 140 aa8.85□□□□□ -0.99
NME1NME1 RBG2P53295 368 aaKnown RBP8.85□□□□□ -0.99
NME1NME1 RSM28Q03430 361 aa8.85□□□□□ -0.99
NME1NME1 MET8P15807 274 aa8.84□□□□□ -0.99
NME1NME1 FTH1P38310 465 aa8.84□□□□□ -0.99
NME1NME1 TAX4P47030 604 aa8.84□□□□□ -0.99
NME1NME1 THI3Q07471 609 aa8.84□□□□□ -0.99
NME1NME1 OLE1P21147 510 aaKnown RBP8.83□□□□□ -1
NME1NME1 TUB1P09733 447 aaKnown RBP8.82□□□□□ -1
NME1NME1 MAL33P38157 468 aa8.82□□□□□ -1
NME1NME1 UBP13P38187 747 aa8.82□□□□□ -1
NME1NME1 RIX1P38883 763 aaPredicted RBP8.82□□□□□ -1
NME1NME1 YGL036WP53185 909 aaPredicted RBP8.82□□□□□ -1
NME1NME1 YPL071CQ02864 156 aa8.82□□□□□ -1
NME1NME1 INA17Q02888 182 aa8.82□□□□□ -1
NME1NME1 PSR1Q07800 427 aa8.82□□□□□ -1
NME1NME1 HXK2P04807 486 aaKnown RBP8.81□□□□□ -1
NME1NME1 HOT13P36078 116 aa8.81□□□□□ -1
NME1NME1 ADE17P38009 592 aaKnown RBP8.81□□□□□ -1
NME1NME1 FLC2P39719 783 aa8.81□□□□□ -1
NME1NME1 IST1P53843 298 aaPredicted RBP8.81□□□□□ -1
NME1NME1 ARP9Q05123 467 aa8.81□□□□□ -1
NME1NME1 BSP1Q06604 576 aa8.81□□□□□ -1
NME1NME1 TAH18Q12181 623 aa8.81□□□□□ -1
NME1NME1 GCN4P03069 281 aa8.8□□□□□ -1
NME1NME1 AGP2P38090 596 aa8.8□□□□□ -1
NME1NME1 YNG2P38806 282 aaKnown RBP8.8□□□□□ -1
NME1NME1 ECM10P39987 644 aa8.8□□□□□ -1
NME1NME1 RPN11P43588 306 aaKnown RBP8.8□□□□□ -1
NME1NME1 NMD4Q12129 218 aa8.8□□□□□ -1
NME1NME1 BNR1P40450 1375 aa8.79□□□□□ -1
NME1NME1 MRP2P10663 115 aaPredicted RBP8.79□□□□□ -1
NME1NME1 MAK32P23060 363 aa8.79□□□□□ -1
NME1NME1 MSS51P32335 436 aa8.79□□□□□ -1
NME1NME1 PDB1P32473 366 aaKnown RBP8.79□□□□□ -1
NME1NME1 MFT1P33441 392 aaKnown RBP8.79□□□□□ -1
NME1NME1 AUR1P36107 401 aaPredicted RBP8.79□□□□□ -1
NME1NME1 YBR225WP38321 900 aa8.79□□□□□ -1
NME1NME1 YPR003CP53394 754 aa8.79□□□□□ -1
NME1NME1 TIM10P87108 93 aa8.79□□□□□ -1
NME1NME1 TDA9Q04545 1251 aa8.79□□□□□ -1
NME1NME1 RCN2Q12044 265 aa8.79□□□□□ -1
NME1NME1 IMD2P38697 523 aaKnown RBP8.78□□□□□ -1
NME1NME1 IMD3P50095 523 aaKnown RBP8.78□□□□□ -1
NME1NME1 DSD1P53095 428 aa8.78□□□□□ -1
NME1NME1 NGL3Q03210 505 aa8.78□□□□□ -1
NME1NME1 MFB1Q04922 465 aa8.78□□□□□ -1
NME1NME1 CTI6Q08923 506 aa8.78□□□□□ -1
NME1NME1 ILS1P09436 1072 aaKnown RBP8.77□□□□□ -1.01
NME1NME1 KAR3P17119 729 aa8.77□□□□□ -1.01
NME1NME1 VMA16P23968 213 aa8.77□□□□□ -1.01
NME1NME1 TPO3Q06451 622 aa8.77□□□□□ -1.01
NME1NME1 IRC3Q06683 689 aa8.77□□□□□ -1.01
NME1NME1 POL4P25615 582 aa8.76□□□□□ -1.01
NME1NME1 PEP3P27801 918 aa8.76□□□□□ -1.01
NME1NME1 MPE1P35728 441 aaKnown RBP8.76□□□□□ -1.01
NME1NME1 BUR6P40096 142 aa8.76□□□□□ -1.01
NME1NME1 CIN1P40987 1014 aa8.76□□□□□ -1.01
NME1NME1 ORC5P50874 479 aa8.76□□□□□ -1.01
NME1NME1 ATP23P53722 227 aa8.76□□□□□ -1.01
NME1NME1 SNU56Q03782 492 aaKnown RBP8.76□□□□□ -1.01
NME1NME1 PET111P08468 800 aa8.75□□□□□ -1.01
NME1NME1 FLO10P36170 1169 aa8.75□□□□□ -1.01
NME1NME1 ERV46P39727 415 aa8.75□□□□□ -1.01
NME1NME1 CTK2P46962 323 aa8.75□□□□□ -1.01
NME1NME1 DPB11P47027 764 aaPredicted RBP8.75□□□□□ -1.01
NME1NME1 BPL1P48445 690 aaPredicted RBP8.75□□□□□ -1.01
NME1NME1 MRX6P48564 524 aa8.75□□□□□ -1.01
NME1NME1 ARE2P53629 642 aaKnown RBP8.75□□□□□ -1.01
NME1NME1 MRPL19P53875 158 aa8.75□□□□□ -1.01
NME1NME1 RPT6Q01939 405 aaKnown RBP8.75□□□□□ -1.01
NME1NME1 YML037CQ03703 340 aa8.75□□□□□ -1.01
NME1NME1 OSW1Q08692 278 aa8.75□□□□□ -1.01
NME1NME1 CIR2Q08822 631 aa8.75□□□□□ -1.01
NME1NME1 YLR049CQ12110 428 aa8.75□□□□□ -1.01
NME1NME1 PKP1P40530 394 aa8.74□□□□□ -1.01
NME1NME1 YFR020WP43600 232 aa8.74□□□□□ -1.01
NME1NME1 IRC6P43615 237 aa8.74□□□□□ -1.01
NME1NME1 RPS7BP48164 190 aaKnown RBP8.74□□□□□ -1.01
NME1NME1 GLO1P50107 326 aa8.74□□□□□ -1.01
NME1NME1 STR3P53101 465 aaKnown RBP8.74□□□□□ -1.01
NME1NME1 VPS75P53853 264 aa8.74□□□□□ -1.01
NME1NME1 ORM2Q06144 216 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms