RNA–Protein interactions for RNA: ENST00000642114.1

SAMMSON-227, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-227ENST00000642114 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
SAMMSON-227ENST00000642114 MYOZ2Q9NPC6 264 aa7.06□□□□□ -1.28
SAMMSON-227ENST00000642114 LRRC37AA6NMS7 1700 aa7.06□□□□□ -1.28
SAMMSON-227ENST00000642114 ASTN2O75129 1339 aaPredicted RBP7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 ZBED9Q6R2W3 1325 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 NCOA4Q13772 614 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 MCM6Q14566 821 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 ZMYM1Q5SVZ6 1142 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 NLRP10Q86W26 655 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 SLC9A9Q8IVB4 645 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 WWC1Q8IX03 1113 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 ZNF333Q96JL9 665 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 TRMT112Q9UI30 125 aaKnown RBP7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 GPC6Q9Y625 555 aaPredicted RBP7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 AKAP11Q9UKA4 1901 aa7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 RBBP6Q7Z6E9 1792 aaKnown RBP7.05□□□□□ -1.28
SAMMSON-227ENST00000642114 COL1A1P02452 1464 aaPredicted RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 DDX60Q8IY21 1712 aaKnown RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 MYO3BQ8WXR4 1341 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 SERTM1A2A2V5 107 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 ADARB2-AS1A8MUL3 147 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 M0R082 166 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 EML1O00423 815 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 HSPA5P11021 654 aaKnown RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 HSP90B1P14625 803 aaKnown RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 ITGB7P26010 798 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 HNRNPUQ00839 825 aaKnown RBP eCLIP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 SLC9C1Q4G0N8 1177 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 LDLRAD1Q5T700 205 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 APOBEC3FQ8IUX4 373 aaKnown RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 ZNF417Q8TAU3 575 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 TBC1D16Q8TBP0 767 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 ZNF587Q96SQ5 575 aaPredicted RBP7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 PODXL2Q9NZ53 605 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 POLLQ9UGP5 575 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 BRCA2P51587 3418 aa7.04□□□□□ -1.28
SAMMSON-227ENST00000642114 NEFMP07197 916 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 EIF4A1P60842 406 aaKnown RBP7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 GPSM2P81274 684 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 SP3Q02447 781 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 SFSWAPQ12872 951 aaKnown RBP7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 TRIM28Q13263 835 aaKnown RBP7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 SF3B3Q15393 1217 aaKnown RBP7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 SLC4A8Q2Y0W8 1093 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 MOB2Q70IA6 237 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 UBE2Q2Q8WVN8 375 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 NACC1Q96RE7 527 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 GMLQ99445 158 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 MDFIQ99750 246 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 R3HDMLQ9H3Y0 253 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 CHMP3Q9Y3E7 222 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 CENPFP49454 3210 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 TRIOBPQ9H2D6 2365 aa7.03□□□□□ -1.28
SAMMSON-227ENST00000642114 USP17L3A6NCW0 530 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 USP17L4A6NCW7 530 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 PPP1R12BO60237 982 aaPredicted RBP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 WDHD1O75717 1129 aaPredicted RBP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 UFL1O94874 794 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 U2AF1L5P0DN76 240 aaPredicted RBP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 EPHA4P54764 986 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 U2AF1Q01081 240 aaKnown RBP eCLIP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 PTPN12Q05209 780 aaKnown RBP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 SPEM2Q0P670 501 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 DCTN1Q14203 1278 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 CC2D1BQ5T0F9 858 aaKnown RBP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 USP17L1Q7RTZ2 530 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 LRP10Q7Z4F1 713 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 DEPDC4Q8N2C3 294 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 CD99L2Q8TCZ2 262 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 TNFRSF25Q93038 417 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 IPO9Q96P70 1041 aaKnown RBP7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 SLC30A3Q99726 388 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 HTATIP2Q9BUP3 242 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 ALG2Q9H553 416 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 KCNQ5Q9NR82 932 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 COG6Q9Y2V7 657 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 PPP2R3BQ9Y5P8 575 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 NR2E3Q9Y5X4 410 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 CEP290O15078 2479 aa7.02□□□□□ -1.29
SAMMSON-227ENST00000642114 COL6A3P12111 3177 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 SCO2A0A1W2PP80 73 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 USP17L5A8MUK1 530 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 IGF2BP3O00425 579 aaKnown RBP eCLIP7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 WNT10BO00744 389 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 CAPN2P17655 700 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 ADH7P40394 386 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 PRMT2P55345 433 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 RPS8P62241 208 aaKnown RBP7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 CRHR2Q13324 411 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 MAP3K11Q16584 847 aa7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 RSPO4Q2I0M5 234 aaPredicted RBP7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
SAMMSON-227ENST00000642114 CEP63Q96MT8 703 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms