RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ZBTB9Q96C00 473 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 MRPL44Q9H9J2 332 aaKnown RBP19.16■□□□□ 0.66
PHGDH-223ENST00000641597 CEP131Q9UPN4 1083 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 PARP3Q9Y6F1 533 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 XDHP47989 1333 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 SLFN14P0C7P3 912 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 FBXO33Q7Z6M2 555 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 STAG2Q8N3U4 1231 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 CASZ1Q86V15 1759 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 A0A1B0GUL6 1792 aa19.15■□□□□ 0.66
PHGDH-223ENST00000641597 GNG11P61952 73 aa19.15■□□□□ 0.66
PHGDH-223ENST00000641597 RPS8P62241 208 aaKnown RBP19.15■□□□□ 0.66
PHGDH-223ENST00000641597 CPVLQ9H3G5 476 aa19.15■□□□□ 0.66
PHGDH-223ENST00000641597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.15■□□□□ 0.66
PHGDH-223ENST00000641597 FAM205AQ6ZU69 1335 aa19.15■□□□□ 0.66
PHGDH-223ENST00000641597 CCT6AP40227 531 aaKnown RBP19.15■□□□□ 0.66
PHGDH-223ENST00000641597 CUL4BQ13620 913 aa19.15■□□□□ 0.66
PHGDH-223ENST00000641597 RCSD1Q6JBY9 416 aa19.15■□□□□ 0.66
PHGDH-223ENST00000641597 PPP1R3GB7ZBB8 358 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 ARHGAP6O43182 974 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 TFRCP02786 760 aaKnown RBP19.14■□□□□ 0.65
PHGDH-223ENST00000641597 XBP1P17861 261 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 CLCN6P51797 869 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 NLRP5P59047 1200 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 RBL2Q08999 1139 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 SLC44A5Q8NCS7 719 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 MCM9Q9NXL9 1143 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 CTNND2Q9UQB3 1225 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 SPATA31A5Q5VU36 1347 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 SPATA31A7Q8IWB4 1347 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 SYNRGQ9UMZ2 1314 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 RCAN1P53805 252 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 SH3RF1Q7Z6J0 888 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 PLIN2Q99541 437 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 MTA3Q9BTC8 594 aa19.14■□□□□ 0.65
PHGDH-223ENST00000641597 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 PP2D1A8MPX8 630 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 ABL1P00519 1130 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 FGRP09769 529 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 HIBADHP31937 336 aaKnown RBP19.13■□□□□ 0.65
PHGDH-223ENST00000641597 CTCFLQ8NI51 663 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-223ENST00000641597 LZTFL1Q9NQ48 299 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-223ENST00000641597 LAMB2P55268 1798 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 SCN7AQ01118 1682 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 A0A1B0GTH6 734 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 USP17L3A6NCW0 530 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 USP17L4A6NCW7 530 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 RNF225M0QZC1 329 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-223ENST00000641597 RAD9BQ6WBX8 426 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 USP17L1Q7RTZ2 530 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 ELOA2Q8IYF1 753 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-223ENST00000641597 IL17RBQ9NRM6 502 aa19.13■□□□□ 0.65
PHGDH-223ENST00000641597 SCG2P13521 617 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 SLC35G1Q2M3R5 365 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 NBPF5PQ86XG9 351 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-223ENST00000641597 EEF2KMTQ96G04 330 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 ZSWIM4Q9H7M6 989 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 PHLPP2Q6ZVD8 1323 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 SEC31AO94979 1220 aaKnown RBP19.12■□□□□ 0.65
PHGDH-223ENST00000641597 H2AFXP16104 143 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-223ENST00000641597 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 IGSF22Q8N9C0 903 aa19.12■□□□□ 0.65
PHGDH-223ENST00000641597 ATP2C1P98194 919 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-223ENST00000641597 TRIML1Q8N9V2 468 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 RREB1Q92766 1687 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 TFAP4Q01664 338 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 E2F4Q16254 413 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 SPATA1Q5VX52 437 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 KANK3Q6NY19 840 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 CDCA7Q9BWT1 371 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-223ENST00000641597 RBM28Q9NW13 759 aaKnown RBP19.11■□□□□ 0.65
PHGDH-223ENST00000641597 GDAQ9Y2T3 454 aa19.11■□□□□ 0.65
PHGDH-223ENST00000641597 GNPATO15228 680 aa19.1■□□□□ 0.65
PHGDH-223ENST00000641597 STX10O60499 249 aa19.1■□□□□ 0.65
PHGDH-223ENST00000641597 ERCC5P28715 1186 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-223ENST00000641597 CASP14P31944 242 aa19.1■□□□□ 0.65
PHGDH-223ENST00000641597 FXR1P51114 621 aaKnown RBP eCLIP19.1■□□□□ 0.656e-7■■■■□ 19.4
PHGDH-223ENST00000641597 CRNKL1Q9BZJ0 848 aaKnown RBP19.1■□□□□ 0.65
PHGDH-223ENST00000641597 ADD3Q9UEY8 706 aaKnown RBP19.1■□□□□ 0.65
PHGDH-223ENST00000641597 GOLGA8HP0CJ92 632 aa19.1■□□□□ 0.65
PHGDH-223ENST00000641597 MNS1Q8NEH6 495 aa19.1■□□□□ 0.65
PHGDH-223ENST00000641597 VPS16Q9H269 839 aa19.1■□□□□ 0.65
PHGDH-223ENST00000641597 ZSCAN12O43309 604 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 TADA3O75528 432 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 DDAH1O94760 285 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 PIP4K2BP78356 416 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 CDKAL1Q5VV42 579 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 RRAGBQ5VZM2 374 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 PDXDC2PQ6P474 469 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 SH3RF3Q8TEJ3 882 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-223ENST00000641597 UBXN4Q92575 508 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 FERMT2Q96AC1 680 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 NLRP3Q96P20 1036 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 NFIXQ14938 502 aa19.09■□□□□ 0.65
PHGDH-223ENST00000641597 KIFC2Q96AC6 838 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms