RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 NEK4P51957 841 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 SREBF2Q12772 1141 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 IFIT1BQ5T764 474 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 TXNRD3Q86VQ6 643 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 MARCH6O60337 910 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 CTNND1O60716 968 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 TSHZ3Q63HK5 1081 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 TNPO1Q92973 898 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 CUL5Q93034 780 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 SYNPO2Q9UMS6 1093 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 IVNS1ABPQ9Y6Y0 642 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 TOP1P11387 765 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 HSPA4P34932 840 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 DGKHQ86XP1 1220 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 ERO1BQ86YB8 467 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 RRAGCQ9HB90 399 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 ZMYM6O95789 1325 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 SHANK3Q9BYB0 1731 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 ZBED4O75132 1171 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 ERLIN2O94905 339 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 HSPD1P10809 573 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 CLNS1AP54105 237 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 ICA1Q05084 483 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 CDC42EP5Q6NZY7 148 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 SEPT14Q6ZU15 432 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 TNMDQ9H2S6 317 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 PDRG1Q9NUG6 133 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 WNT10BO00744 389 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 HUNKP57058 714 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 RBBP5Q15291 538 aaKnown RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 LRSAM1Q6UWE0 723 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SAMD7Q7Z3H4 446 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 FAM160B2Q86V87 743 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 OTUD7AQ8TE49 926 aaPredicted RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 DCP1AQ9NPI6 582 aaPredicted RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 TNS1Q9HBL0 1735 aaKnown RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 CXCL11O14625 94 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 NAA25Q14CX7 972 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SPATA24Q86W54 205 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 CEP120Q8N960 986 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 CCDC148Q8NFR7 591 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SMCR8Q8TEV9 937 aaPredicted RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 LPAR1Q92633 364 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 EPS15P42566 896 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 TFAP4Q01664 338 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 NOGQ13253 232 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 WRNIP1Q96S55 665 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SRRTQ9BXP5 876 aaKnown RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 ANTXR1Q9H6X2 564 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 DUOX1Q9NRD9 1551 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SCN7AQ01118 1682 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 MANSC4A6NHS7 340 aaPredicted RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 ADCY5O95622 1261 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 CAPN2P17655 700 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SLC1A4P43007 532 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 RAB3GAP1Q15042 981 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 ZSCAN23Q3MJ62 389 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 CEP112Q8N8E3 955 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 TCHPQ9BT92 498 aa6.43□□□□□ -1.38
RTTN-218ENST00000640408 SPATS2LQ9NUQ6 558 aaKnown RBP6.43□□□□□ -1.38
RTTN-218ENST00000640408 NUP98P52948 1817 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 ZBTB43O43298 467 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 ORC4O43929 436 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 YBX3P16989 372 aaKnown RBP eCLIP6.42□□□□□ -1.38
RTTN-218ENST00000640408 GSDMDP57764 484 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 PI16Q6UXB8 463 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 MAP4K1Q92918 833 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 OSBP2Q969R2 916 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 PRMT6Q96LA8 375 aaPredicted RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 GMLQ99445 158 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 SAP30BPQ9UHR5 308 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 FGAP02671 866 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 CETPP11597 493 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 HOXD10P28358 340 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 RCAN1P53805 252 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 CREB3L3Q68CJ9 461 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 FAM177A1Q8N128 213 aaPredicted RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 NEDD1Q8NHV4 660 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 UBR3Q6ZT12 1888 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 EBAG9O00559 213 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 CA12O43570 354 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 TBC1D12O60347 775 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 CELF2O95319 508 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 SLU7O95391 586 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 HAND2P61296 217 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 SNAPC2Q13487 334 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 C12orf60Q5U649 245 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 SECISBP2LQ93073 1101 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 KDM4AO75164 1064 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 TTLL1O95922 423 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 EDC3Q96F86 508 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 FBXO40Q9UH90 709 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 MKRN1Q9UHC7 482 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 WDR19Q8NEZ3 1342 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 GOLGA8AA7E2F4 631 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms