RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	GOPC	Q9HD26	462 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	NYAP2	Q9P242	653 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	PLIN4	Q96Q06	1357 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	LAMA4	Q16363	1823 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	ORC4	O43929	436 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	RAD21	O60216	631 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	SLC34A2	O95436	690 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	AKNAD1	Q5T1N1	836 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	KIAA1211	Q6ZU35	1233 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	SIAH1	Q8IUQ4	282 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	CEP95	Q96GE4	821 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	VCPKMT	Q9H867	229 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	TRIM17	Q9Y577	477 aa		18.75	■□□□□ 0.59
SPIN3-233	ENST00000640039	TTLL1	O95922	423 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	BCR	P11274	1271 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	LACTB	P83111	547 aa	Predicted RBP	18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	ANKRD13C	Q8N6S4	541 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	STAG1	Q8WVM7	1258 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	TANGO6	Q9C0B7	1094 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	EFCC1	Q9HA90	598 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	INCENP	Q9NQS7	918 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	MTMR4	Q9NYA4	1195 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	CLIP2	Q9UDT6	1046 aa		18.74	■□□□□ 0.59
SPIN3-233	ENST00000640039	MYH4	Q9Y623	1939 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	IGKV6D-41	A0A0C4DH26	115 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	FGR	P09769	529 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	HERVK_113	P62684	666 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	FAM110C	Q1W6H9	321 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	TBC1D10C	Q8IV04	446 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	SPICE1	Q8N0Z3	855 aa		18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	P2RX7	Q99572	595 aa	Known RBP	18.73	■□□□□ 0.59
SPIN3-233	ENST00000640039	WDR46	O15213	610 aa	Known RBP	18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	CDC45	O75419	566 aa		18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	ECM2	O94769	699 aa	Predicted RBP	18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	CATSPERG	Q6ZRH7	1159 aa		18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	OTOP1	Q7RTM1	612 aa		18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	ESYT1	Q9BSJ8	1104 aa		18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	NBPF3	Q9H094	633 aa		18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	STX8	Q9UNK0	236 aa		18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039		U3KPZ7	1027 aa	Predicted RBP	18.72	■□□□□ 0.59
SPIN3-233	ENST00000640039	FMNL1	O95466	1100 aa	Predicted RBP	18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	PSMC4	P43686	418 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	NT5C2	P49902	561 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	FCGRT	P55899	365 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	PTH1R	Q03431	593 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	ESR2	Q92731	530 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	SYNPO2	Q9UMS6	1093 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	TACC3	Q9Y6A5	838 aa		18.71	■□□□□ 0.59
SPIN3-233	ENST00000640039	GNRH1	P01148	92 aa		18.7	■□□□□ 0.58
SPIN3-233	ENST00000640039	COG2	Q14746	738 aa		18.7	■□□□□ 0.58
SPIN3-233	ENST00000640039	KIAA1755	Q5JYT7	1200 aa		18.7	■□□□□ 0.58
SPIN3-233	ENST00000640039	LRRC47	Q8N1G4	583 aa	Known RBP	18.7	■□□□□ 0.58
SPIN3-233	ENST00000640039	PAGR1	Q9BTK6	254 aa		18.7	■□□□□ 0.58
SPIN3-233	ENST00000640039	ARHGAP39	Q9C0H5	1083 aa		18.7	■□□□□ 0.58
SPIN3-233	ENST00000640039		F5H6K3	240 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	FLOT1	O75955	427 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	HOXD10	P28358	340 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	KLRC3	Q07444	240 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	GPRC5A	Q8NFJ5	357 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	MKL1	Q969V6	931 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	KRT23	Q9C075	422 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	CNNM2	Q9H8M5	875 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	ANO2	Q9NQ90	1003 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	HOXC10	Q9NYD6	342 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	NEDD4	P46934	1319 aa		18.69	■□□□□ 0.58
SPIN3-233	ENST00000640039	NMT2	O60551	498 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	NDUFB10	O96000	172 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	TRDN	Q13061	729 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	FAM83B	Q5T0W9	1011 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	CCAR1	Q8IX12	1150 aa	Known RBP	18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	GMCL1P1	Q8NEA9	526 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	MAP4K1	Q92918	833 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	IL17RB	Q9NRM6	502 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	MORF4L1	Q9UBU8	362 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	ISY1	Q9ULR0	285 aa	Known RBP	18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	RABGAP1	Q9Y3P9	1069 aa		18.68	■□□□□ 0.58
SPIN3-233	ENST00000640039	ZSWIM8	A7E2V4	1837 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	MGAM	O43451	1857 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	TNPO2	O14787	897 aa	Known RBP	18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	KDM4A	O75164	1064 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	ERVK-9	P63128	1117 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	ERVK-24	P63145	666 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	CAP1	Q01518	475 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	LBX2	Q6XYB7	198 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	IQCA1	Q86XH1	822 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	TRIM47	Q96LD4	638 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	TCP11L1	Q9NUJ3	509 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	RBM8A	Q9Y5S9	174 aa	Known RBP	18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039	MYPN	Q86TC9	1320 aa		18.67	■□□□□ 0.58
SPIN3-233	ENST00000640039		B4E1Z4	1266 aa		18.66	■□□□□ 0.58
SPIN3-233	ENST00000640039	PRMT2	P55345	433 aa		18.66	■□□□□ 0.58
SPIN3-233	ENST00000640039	CCNA1	P78396	465 aa		18.66	■□□□□ 0.58
SPIN3-233	ENST00000640039	CCDC178	Q5BJE1	867 aa		18.66	■□□□□ 0.58
SPIN3-233	ENST00000640039	SLFN13	Q68D06	897 aa		18.66	■□□□□ 0.58
SPIN3-233	ENST00000640039	MB21D1	Q8N884	522 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms