RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TUBB4BP68371 445 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 LMBR1Q8WVP7 490 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 PPP2R2CQ9Y2T4 447 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 KCNJ18B7U540 433 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
SCARB2-216ENST00000639300 KCNJ12Q14500 433 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 LZTS2Q9BRK4 669 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 SMIM23A6NLE4 172 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 IFNAR1P17181 557 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
SCARB2-216ENST00000639300 QRICH2Q9H0J4 1663 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 OPA1O60313 960 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 TUBBP07437 444 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 TBC1D22AQ8WUA7 517 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 PLVAPQ9BX97 442 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 ATP1A3P13637 1013 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 MORC3Q14149 939 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 UTP14CQ5TAP6 766 aaKnown RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 TYW1BQ6NUM6 668 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 USP37Q86T82 979 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 JDP2Q8WYK2 163 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 FAM212AQ96EL1 285 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 IL25Q9H293 177 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 BACH1O14867 736 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 HAUS3Q68CZ6 603 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 DDX39AO00148 427 aaKnown RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 MICALCLQ6ZW33 695 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 BRINP3Q76B58 766 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 KIAA0825Q8IV33 1275 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 PLEKHA4Q9H4M7 779 aa16.09■□□□□ 0.17
SCARB2-216ENST00000639300 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-216ENST00000639300 CFAP58Q5T655 872 aa16.08■□□□□ 0.17
SCARB2-216ENST00000639300 CRB1P82279 1406 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 CYP2E1P05181 493 aaPredicted RBP16.08■□□□□ 0.16
SCARB2-216ENST00000639300 EPB41P11171 864 aaKnown RBP16.08■□□□□ 0.16
SCARB2-216ENST00000639300 BTDP43251 543 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 TMEM87AQ8NBN3 555 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
SCARB2-216ENST00000639300 NUP58Q9BVL2 599 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 FOXP1Q9H334 677 aaPredicted RBP16.08■□□□□ 0.16
SCARB2-216ENST00000639300 ATP8A2Q9NTI2 1148 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 PPP6R2O75170 966 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
SCARB2-216ENST00000639300 SLC9C1Q4G0N8 1177 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 TRIML1Q8N9V2 468 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
SCARB2-216ENST00000639300 CCDC84Q86UT8 332 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-216ENST00000639300 DNM3Q9UQ16 869 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 EEF2P13639 858 aaKnown RBP16.07■□□□□ 0.16
SCARB2-216ENST00000639300 SLC39A2Q9NP94 309 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 FRMD4BQ9Y2L6 1034 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 CCDC25Q86WR0 208 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 RABEP2Q9H5N1 569 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 SCARF1Q14162 830 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 CERS3Q8IU89 383 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 CCDC155Q8N6L0 562 aa16.07■□□□□ 0.16
SCARB2-216ENST00000639300 TNNC1P63316 161 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 C8orf74Q6P047 294 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 NEK8Q86SG6 692 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 RDH13Q8NBN7 331 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 NAP1L4Q99733 375 aaKnown RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 HINFPQ9BQA5 517 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 PCDHA12Q9UN75 941 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 GTPBP6O43824 516 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 MMP1P03956 469 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 TSGA10Q9BZW7 698 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 NEBLO76041 1014 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 RPN1P04843 607 aaKnown RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 USP17L8P0C7I0 530 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 KLHL30Q0D2K2 578 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 EPSTI1Q96J88 318 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 PCDHB13Q9Y5F0 798 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 LIFRP42702 1097 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
SCARB2-216ENST00000639300 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms