RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SLC15A5A6NIM6 579 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 SMIM22K7EJ46 135 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.85
SMN2-216ENST00000638794 AKR1B1P15121 316 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 PTPREP23469 700 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 UBE3CQ15386 1083 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 CLEC10AQ8IUN9 316 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 C7orf61Q8IZ16 206 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 FLRT1Q9NZU1 646 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 IVNS1ABPQ9Y6Y0 642 aa20.33■□□□□ 0.85
SMN2-216ENST00000638794 DNAH12Q6ZR08 3092 aa20.33■□□□□ 0.84
SMN2-216ENST00000638794 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 GRB14Q14449 540 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 COG2Q14746 738 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 KIAA1755Q5JYT7 1200 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 LHX8Q68G74 356 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 TANGO6Q9C0B7 1094 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 STAP2Q9UGK3 403 aa20.32■□□□□ 0.84
SMN2-216ENST00000638794 PFASO15067 1338 aa20.31■□□□□ 0.84
SMN2-216ENST00000638794 ICA1Q05084 483 aa20.31■□□□□ 0.84
SMN2-216ENST00000638794 C12orf60Q5U649 245 aa20.31■□□□□ 0.84
SMN2-216ENST00000638794 SIAH1Q8IUQ4 282 aa20.31■□□□□ 0.84
SMN2-216ENST00000638794 ZMYND8Q9ULU4 1186 aaPredicted RBP20.31■□□□□ 0.84
SMN2-216ENST00000638794 ZNF236Q9UL36 1845 aa20.31■□□□□ 0.84
SMN2-216ENST00000638794 USP17L12C9JPN9 530 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 USP17L21D6R901 530 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 HOXC6P09630 235 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 CDK8P49336 464 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 AMOTL1Q8IY63 956 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 LPAR1Q92633 364 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
SMN2-216ENST00000638794 PUS7LQ9H0K6 701 aaKnown RBP20.3■□□□□ 0.84
SMN2-216ENST00000638794 ARHGEF10LQ9HCE6 1279 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 HOXC10Q9NYD6 342 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 SLC4A4Q9Y6R1 1079 aa20.3■□□□□ 0.84
SMN2-216ENST00000638794 A0A1W2PPC1 479 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 COL6A1P12109 1028 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 MFSD14CQ5VZR4 134 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 ZSCAN25Q6NSZ9 544 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 C16orf86Q6ZW13 317 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 SPICE1Q8N0Z3 855 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 NPLOC4Q8TAT6 608 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 SPATC1LQ9H0A9 340 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 TMX2Q9Y320 296 aa20.29■□□□□ 0.84
SMN2-216ENST00000638794 COL11A1P12107 1806 aaPredicted RBP20.28■□□□□ 0.84
SMN2-216ENST00000638794 ATP2B2Q01814 1243 aa20.28■□□□□ 0.84
SMN2-216ENST00000638794 CCDC17Q96LX7 622 aa20.28■□□□□ 0.84
SMN2-216ENST00000638794 SH2D4AQ9H788 454 aa20.28■□□□□ 0.84
SMN2-216ENST00000638794 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
SMN2-216ENST00000638794 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
SMN2-216ENST00000638794 FLOT1O75955 427 aa20.27■□□□□ 0.84
SMN2-216ENST00000638794 SYN1P17600 705 aa20.27■□□□□ 0.84
SMN2-216ENST00000638794 DSG3P32926 999 aa20.27■□□□□ 0.84
SMN2-216ENST00000638794 CTR9Q6PD62 1173 aa20.27■□□□□ 0.84
SMN2-216ENST00000638794 GDF15Q99988 308 aa20.27■□□□□ 0.84
SMN2-216ENST00000638794 GREB1LQ9C091 1923 aaPredicted RBP20.26■□□□□ 0.83
SMN2-216ENST00000638794 IGHA2P01877 340 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 ERCC3P19447 782 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 ADORA2AP29274 412 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 CYP2C19P33261 490 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 SHCBP1Q8NEM2 672 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 ATG4CQ96DT6 458 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
SMN2-216ENST00000638794 SOX1O00570 391 aaPredicted RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 WDR46O15213 610 aaKnown RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 STRNO43815 780 aa20.25■□□□□ 0.83
SMN2-216ENST00000638794 EEF2P13639 858 aaKnown RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 PLS1Q14651 629 aa20.25■□□□□ 0.83
SMN2-216ENST00000638794 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
SMN2-216ENST00000638794 DPP9Q86TI2 863 aa20.25■□□□□ 0.83
SMN2-216ENST00000638794 TRPV1Q8NER1 839 aa20.25■□□□□ 0.83
SMN2-216ENST00000638794 STRBPQ96SI9 672 aaKnown RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 ARPP21Q9UBL0 812 aaPredicted RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 DDX20Q9UHI6 824 aaKnown RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
SMN2-216ENST00000638794 CNGA1P29973 690 aa20.24■□□□□ 0.83
SMN2-216ENST00000638794 BMP8BP34820 402 aa20.24■□□□□ 0.83
SMN2-216ENST00000638794 LRRC26Q2I0M4 334 aa20.24■□□□□ 0.83
SMN2-216ENST00000638794 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
SMN2-216ENST00000638794 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
SMN2-216ENST00000638794 KANSL2Q9H9L4 492 aa20.24■□□□□ 0.83
SMN2-216ENST00000638794 MSCO60682 206 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 COBLO75128 1261 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 CYBAP13498 195 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 MAGEA10P43363 369 aaPredicted RBP20.23■□□□□ 0.83
SMN2-216ENST00000638794 OLFML2BQ68BL8 750 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 NCAPG2Q86XI2 1143 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMN2-216ENST00000638794 MROH8Q9H579 483 aa20.23■□□□□ 0.83
SMN2-216ENST00000638794 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
SMN2-216ENST00000638794 TMEM132BQ14DG7 1078 aa20.22■□□□□ 0.83
SMN2-216ENST00000638794 OSBP2Q969R2 916 aa20.22■□□□□ 0.83
SMN2-216ENST00000638794 LRCH3Q96II8 777 aa20.22■□□□□ 0.83
SMN2-216ENST00000638794 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
SMN2-216ENST00000638794 COL6A3P12111 3177 aa20.22■□□□□ 0.83
SMN2-216ENST00000638794 SBK1Q52WX2 424 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms