RNA–Protein interactions for RNA: ENST00000638084.1

LINC00598-215, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,974 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-215ENST00000638084 BEND6Q5SZJ8 279 aaPredicted RBP8.39□□□□□ -1.07
LINC00598-215ENST00000638084 PDXDC2PQ6P474 469 aa8.39□□□□□ -1.07
LINC00598-215ENST00000638084 MSANTD4Q8NCY6 345 aa8.39□□□□□ -1.07
LINC00598-215ENST00000638084 HNRNPLLQ8WVV9 542 aaKnown RBP8.39□□□□□ -1.07
LINC00598-215ENST00000638084 ZSCAN10Q96SZ4 725 aaPredicted RBP8.39□□□□□ -1.07
LINC00598-215ENST00000638084 UBAC1Q9BSL1 405 aa8.39□□□□□ -1.07
LINC00598-215ENST00000638084 LZTFL1Q9NQ48 299 aa8.39□□□□□ -1.07
LINC00598-215ENST00000638084 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
LINC00598-215ENST00000638084 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
LINC00598-215ENST00000638084 ABCA3Q99758 1704 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 COL4A1P02462 1669 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 RTL9Q8NET4 1388 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 MINDY4BA8MYZ0 360 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 H3BQF6 201 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 TULP2O00295 520 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 COBLO75128 1261 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 TFRCP02786 760 aaKnown RBP8.38□□□□□ -1.07
LINC00598-215ENST00000638084 VEGFAP15692 232 aaPredicted RBP8.38□□□□□ -1.07
LINC00598-215ENST00000638084 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 ERVK-24P63145 666 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 CHRNDQ07001 517 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 BRD3Q15059 726 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 KRT31Q15323 416 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 PPFIBP1Q86W92 1011 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 ESR2Q92731 530 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 STAMQ92783 540 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 CCDC51Q96ER9 411 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 CTAGE1Q96RT6 745 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 PNKPQ96T60 521 aa8.38□□□□□ -1.07
LINC00598-215ENST00000638084 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 MAGEB6P1A0A0J9YX57 407 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 BMP15O95972 392 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CDC25AP30304 524 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 EVX2Q03828 476 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 PTGDRQ13258 359 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 ZNF569Q5MCW4 686 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 TTC38Q5R3I4 469 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 TMTC3Q6ZXV5 915 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 IRF2BP1Q8IU81 584 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 SRBD1Q8N5C6 995 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 C4orf32Q8N8J7 132 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CCDC34Q96HJ3 373 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 ZSWIM4Q9H7M6 989 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 IQSEC3Q9UPP2 1182 aaPredicted RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 COL1A1P02452 1464 aaPredicted RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 KIF5CO60282 957 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CAMTA2O94983 1202 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 NTSR2O95665 410 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 DYNLL1P63167 89 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 AMPD2Q01433 879 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 AKAP17AQ02040 695 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 TUBB2AQ13885 445 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CTR9Q6PD62 1173 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 SLC35F6Q8N357 371 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 MSL3Q8N5Y2 521 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 NEK11Q8NG66 645 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CDC5LQ99459 802 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 TUBB2BQ9BVA1 445 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 BRIP1Q9BX63 1249 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 BLZF1Q9H2G9 400 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 PUF60Q9UHX1 559 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 RWDD2AQ9UIY3 292 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 L1RE1Q9UN81 338 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CTNND2Q9UQB3 1225 aa8.37□□□□□ -1.07
LINC00598-215ENST00000638084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 REXO2Q9Y3B8 237 aaKnown RBP8.37□□□□□ -1.07
LINC00598-215ENST00000638084 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 ZBTB22O15209 634 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 XBP1P17861 261 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 COPB1P53618 953 aaKnown RBP8.36□□□□□ -1.07
LINC00598-215ENST00000638084 GYS2P54840 703 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 CCDC152Q4G0S7 254 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 IFIT1BQ5T764 474 aaKnown RBP8.36□□□□□ -1.07
LINC00598-215ENST00000638084 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 TMTC1Q8IUR5 882 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 CEP112Q8N8E3 955 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 ABHD10Q9NUJ1 306 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 RBM28Q9NW13 759 aaKnown RBP8.36□□□□□ -1.07
LINC00598-215ENST00000638084 BTG4Q9NY30 223 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
LINC00598-215ENST00000638084 DUOX1Q9NRD9 1551 aa8.36□□□□□ -1.07
LINC00598-215ENST00000638084 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 GTPBP6O43824 516 aaPredicted RBP8.35□□□□□ -1.07
LINC00598-215ENST00000638084 DDAH1O94760 285 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 CAPN2P17655 700 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
LINC00598-215ENST00000638084 CCT6AP40227 531 aaKnown RBP8.35□□□□□ -1.07
LINC00598-215ENST00000638084 GYG1P46976 350 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 IRX5P78411 483 aaPredicted RBP8.35□□□□□ -1.07
LINC00598-215ENST00000638084 FILIP1LQ4L180 1135 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 TCP11X2Q5H9J9 407 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 RRAGBQ5VZM2 374 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 IQUBQ8NA54 791 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 VPS16Q9H269 839 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 ABCB6Q9NP58 842 aa8.35□□□□□ -1.07
LINC00598-215ENST00000638084 TMEM51Q9NW97 253 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms