RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 CKAP2LQ8IYA6 745 aa18.31■□□□□ 0.52
CACNA1A-231ENST00000636816 FSIP1Q8NA03 581 aa18.31■□□□□ 0.52
CACNA1A-231ENST00000636816 KCNG4Q8TDN1 519 aa18.31■□□□□ 0.52
CACNA1A-231ENST00000636816 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
CACNA1A-231ENST00000636816 CLSTN2Q9H4D0 955 aa18.31■□□□□ 0.52
CACNA1A-231ENST00000636816 DNAJC18Q9H819 358 aa18.31■□□□□ 0.52
CACNA1A-231ENST00000636816 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 SCG2P13521 617 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 NPY5RQ15761 445 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 NOM1Q5C9Z4 860 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 RSBN1LQ6PCB5 846 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 ENGASEQ8NFI3 743 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 TNMDQ9H2S6 317 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 MTMR4Q9NYA4 1195 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 A0A1B0GVL5 298 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 HLA-DOAP06340 250 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 XBP1P17861 261 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 PFKFB3Q16875 520 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 AXDND1Q5T1B0 1012 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 CABP5Q9NP86 173 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 SWAP70Q9UH65 585 aa18.3■□□□□ 0.52
CACNA1A-231ENST00000636816 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
CACNA1A-231ENST00000636816 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-231ENST00000636816 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-231ENST00000636816 GMLQ99445 158 aa18.29■□□□□ 0.52
CACNA1A-231ENST00000636816 USP17L5A8MUK1 530 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 MAP3K11Q16584 847 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 DALRD3Q5D0E6 543 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 GPKOWQ92917 476 aaPredicted RBP eCLIP18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 A0A1W2PQ27 194 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 A0A1W2PQ64 194 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 A0A1W2PQD8 194 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 KLRF2D3W0D1 207 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 ATP2B1P20020 1258 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 KRT2P35908 639 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 NDUFA8P51970 172 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 CCDC73Q6ZRK6 1079 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 CLIP2Q9UDT6 1046 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 PLIN4Q96Q06 1357 aa18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 BRCA1P38398 1863 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-231ENST00000636816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 GNAQP50148 359 aa18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 FAM160A1Q05DH4 1040 aa18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 FMR1NBQ8N0W7 255 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 MRPS27Q92552 414 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 CLIC6Q96NY7 704 aa18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 EHD4Q9H223 541 aa18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 ZNRF3Q9ULT6 936 aa18.27■□□□□ 0.52
CACNA1A-231ENST00000636816 PARP1P09874 1014 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 TYW1BQ6NUM6 668 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 RBM43Q6ZSC3 357 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 TNFRSF25Q93038 417 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 DHX36Q9H2U1 1008 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 PI4KBQ9UBF8 816 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 PPP6R2O75170 966 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 NLRP5P59047 1200 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 RILPL1Q5EBL4 403 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 NIM1KQ8IY84 436 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 MRVI1Q9Y6F6 885 aa18.26■□□□□ 0.51
CACNA1A-231ENST00000636816 FER1L6Q2WGJ9 1857 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 CLRN2A0PK11 232 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 SPDYE2BA6NHP3 402 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 WNT7AO00755 349 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 SPDYE6P0CI01 402 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 CXCL9Q07325 125 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 UBA5Q9GZZ9 404 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 VAT1LQ9HCJ6 419 aa18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-231ENST00000636816 MYO3BQ8WXR4 1341 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 TCP10L2B9ZVM9 353 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 PDHBP11177 359 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 SHC4Q6S5L8 630 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 VPS33BQ9H267 617 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 MYH4Q9Y623 1939 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 NFKBIEO00221 500 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 TTLL1O95922 423 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 CMA1P23946 247 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 GRIN1Q05586 938 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 TYRO3Q06418 890 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 WWC2Q6AWC2 1192 aa18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-231ENST00000636816 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
CACNA1A-231ENST00000636816 KINO60870 393 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-231ENST00000636816 CCDC192P0DO97 292 aa18.23■□□□□ 0.51
CACNA1A-231ENST00000636816 PFKFB1P16118 471 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms