RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PARP14Q460N5 1801 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 CYP2D7A0A087X1C5 515 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 MAGEB6P1A0A0J9YX57 407 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 MPHOSPH10O00566 681 aaKnown RBP15.66■□□□□ 0.1
LINC00339-206ENST00000634451 PRKAB2O43741 272 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 POLR3DP05423 398 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-206ENST00000634451 HOXC6P09630 235 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 ADORA2AP29274 412 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 CCNA1P78396 465 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-206ENST00000634451 LBX2Q6XYB7 198 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 TTC6Q86TZ1 520 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 SIAH1Q8IUQ4 282 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
LINC00339-206ENST00000634451 SPICE1Q8N0Z3 855 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
LINC00339-206ENST00000634451 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-206ENST00000634451 AKR1B1P15121 316 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 ERCC3P19447 782 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 USP14P54578 494 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 MAP3K12Q12852 859 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 C9orf50Q5SZB4 431 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 LPAR1Q92633 364 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 TANGO6Q9C0B7 1094 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 CABP5Q9NP86 173 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 MCM9Q9NXL9 1143 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 ATP11BQ9Y2G3 1177 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 IVNS1ABPQ9Y6Y0 642 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 COL11A1P12107 1806 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-206ENST00000634451 ZNF236Q9UL36 1845 aa15.65■□□□□ 0.1
LINC00339-206ENST00000634451 MYH8P13535 1937 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 GOLIM4O00461 696 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 SLC9C2Q5TAH2 1124 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 SH3RF1Q7Z6J0 888 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 ATG4CQ96DT6 458 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 DNAJC2Q99543 621 aaKnown RBP15.64■□□□□ 0.09
LINC00339-206ENST00000634451 SPATC1LQ9H0A9 340 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 ARMT1Q9H993 441 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
LINC00339-206ENST00000634451 ZNFX1Q9P2E3 1918 aaKnown RBP15.64■□□□□ 0.09
LINC00339-206ENST00000634451 CDH23Q9H251 3354 aa15.64■□□□□ 0.09
LINC00339-206ENST00000634451 DNM1LO00429 736 aa15.63■□□□□ 0.09
LINC00339-206ENST00000634451 GLRX3O76003 335 aaKnown RBP15.63■□□□□ 0.09
LINC00339-206ENST00000634451 SHHQ15465 462 aa15.63■□□□□ 0.09
LINC00339-206ENST00000634451 TRIM60Q495X7 471 aa15.63■□□□□ 0.09
LINC00339-206ENST00000634451 RHPN1Q8TCX5 695 aa15.63■□□□□ 0.09
LINC00339-206ENST00000634451 FERMT2Q96AC1 680 aa15.63■□□□□ 0.09
LINC00339-206ENST00000634451 LENG1Q96BZ8 264 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-206ENST00000634451 COL25A1Q9BXS0 654 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-206ENST00000634451 VCANP13611 3396 aa15.63■□□□□ 0.09
LINC00339-206ENST00000634451 PLS1Q14651 629 aa15.62■□□□□ 0.09
LINC00339-206ENST00000634451 COG2Q14746 738 aa15.62■□□□□ 0.09
LINC00339-206ENST00000634451 FAM47AQ5JRC9 791 aa15.62■□□□□ 0.09
LINC00339-206ENST00000634451 DPP9Q86TI2 863 aa15.62■□□□□ 0.09
LINC00339-206ENST00000634451 PRDM5Q9NQX1 630 aaPredicted RBP15.62■□□□□ 0.09
LINC00339-206ENST00000634451 FBXO28Q9NVF7 368 aa15.62■□□□□ 0.09
LINC00339-206ENST00000634451 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
LINC00339-206ENST00000634451 TRIM43BA6NCK2 446 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 MBD4O95243 580 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 ITGB8P26012 769 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
LINC00339-206ENST00000634451 SLC39A5Q6ZMH5 540 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 NCAPG2Q86XI2 1143 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 SIRT2Q8IXJ6 389 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 BADQ92934 168 aa15.61■□□□□ 0.09
LINC00339-206ENST00000634451 TRIM43Q96BQ3 446 aaPredicted RBP15.61■□□□□ 0.09
LINC00339-206ENST00000634451 LBHD1Q9BQE6 289 aaPredicted RBP15.61■□□□□ 0.09
LINC00339-206ENST00000634451 CRNKL1Q9BZJ0 848 aaKnown RBP15.61■□□□□ 0.09
LINC00339-206ENST00000634451 IGSF3O75054 1194 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 FLOT1O75955 427 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 PGK2P07205 417 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 TAL1P17542 331 aaPredicted RBP15.6■□□□□ 0.09
LINC00339-206ENST00000634451 DSG3P32926 999 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 ADCYAP1R1P41586 468 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 TMEM132BQ14DG7 1078 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 OLFML2BQ68BL8 750 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 PDLIM7Q9NR12 457 aa15.6■□□□□ 0.09
LINC00339-206ENST00000634451 MSCO60682 206 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 EPHB4P54760 987 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 ICA1Q05084 483 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 LRRC41Q15345 812 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 TMEM179Q6ZVK1 233 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 CERS3Q8IU89 383 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC00339-206ENST00000634451 MAML3Q96JK9 1138 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 BOLA2Q9H3K6 86 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 PLXNA1Q9UIW2 1896 aa15.59■□□□□ 0.09
LINC00339-206ENST00000634451 SEPT4O43236 478 aa15.58■□□□□ 0.08
LINC00339-206ENST00000634451 SNX17Q15036 470 aa15.58■□□□□ 0.08
LINC00339-206ENST00000634451 ERC1Q8IUD2 1116 aa15.58■□□□□ 0.08
LINC00339-206ENST00000634451 SHCBP1Q8NEM2 672 aa15.58■□□□□ 0.08
LINC00339-206ENST00000634451 CDX2Q99626 313 aaPredicted RBP15.58■□□□□ 0.08
LINC00339-206ENST00000634451 TTYH1Q9H313 450 aaPredicted RBP15.58■□□□□ 0.08
LINC00339-206ENST00000634451 VCPKMTQ9H867 229 aa15.58■□□□□ 0.08
LINC00339-206ENST00000634451 HOXC10Q9NYD6 342 aa15.58■□□□□ 0.08
LINC00339-206ENST00000634451 KBTBD13C9JR72 458 aa15.57■□□□□ 0.08
LINC00339-206ENST00000634451 PGK1P00558 417 aa15.57■□□□□ 0.08
LINC00339-206ENST00000634451 ADD2P35612 726 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms