RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 PBRM1Q86U86 1689 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 A0A0A0MRY4 1105 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 KRTAP9-6A0A140TA67 174 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 ANKRD34BA5PLL1 514 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 CLEC3AO75596 197 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 SOX4Q06945 474 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 SLC10A6Q3KNW5 377 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 IGF2-ASQ6U949 168 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 PODNQ7Z5L7 613 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 ZBTB38Q8NAP3 1195 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 GPATCH3Q96I76 525 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 PCDH12Q9NPG4 1184 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 DISC1Q9NRI5 854 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 SUCOQ9UBS9 1254 aaKnown RBP7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 PCDHB10Q9UN67 800 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 MAPKBP1O60336 1514 aa7.04□□□□□ -1.28
TRAPPC9-216ENST00000634178 CEP170Q5SW79 1584 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 KDM6BO15054 1643 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 FAM86C2PA6NEL3 165 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 ASMTLO95671 621 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 ADH5P11766 374 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 SNRPNP63162 240 aaKnown RBP7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 TRIM28Q13263 835 aaKnown RBP7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 SV2CQ496J9 727 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 ANKRD34AQ69YU3 496 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 HEATR6Q6AI08 1181 aaKnown RBP7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 FDX2Q6P4F2 183 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 ACAD11Q709F0 780 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 CYB5D2Q8WUJ1 264 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 KLHL6Q8WZ60 621 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 SLC6A18Q96N87 628 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 KIF2CQ99661 725 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 METTL14Q9HCE5 456 aaKnown RBP7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 FGD5Q6ZNL6 1462 aa7.03□□□□□ -1.28
TRAPPC9-216ENST00000634178 NUP160Q12769 1436 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 RNGTTO60942 597 aaKnown RBP7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 TTLL4Q14679 1199 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 MFSD2AQ8NA29 543 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 C12orf50Q8NA57 414 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 PSMG3-AS1Q96PY0 264 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 FOXQ1Q9C009 403 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 LRP2BPQ9P2M1 347 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 PCOLCE2Q9UKZ9 415 aa7.02□□□□□ -1.29
TRAPPC9-216ENST00000634178 DIP2BQ9P265 1576 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 FAM153BP0C7A2 387 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 ELNP15502 786 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 COL8A1P27658 744 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 POLR2BP30876 1174 aaKnown RBP7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 ASPAP45381 313 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 RNF4P78317 190 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 PRRT3Q5FWE3 981 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 KIAA1211Q6ZU35 1233 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 CDC6Q99741 560 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 GBP3Q9H0R5 595 aa7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 GSX1Q9H4S2 264 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC9-216ENST00000634178 GRIN2AQ12879 1464 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 TRAV20A0A0B4J274 112 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 GNB5O14775 395 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 HCLS1P14317 486 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 NTF4P34130 210 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 MASP1P48740 699 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 SLBPQ14493 270 aaKnown RBP eCLIP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 PRAMEF13Q5VWM6 474 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 ZC3HAV1Q7Z2W4 902 aaKnown RBP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 TMEM192Q8IY95 271 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 SMYD4Q8IYR2 804 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 TMEM130Q8N3G9 435 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 CRACR2BQ8N4Y2 399 aaPredicted RBP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 YIPF2Q9BWQ6 316 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 FBRSQ9HAH7 460 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 NOP53Q9NZM5 478 aaKnown RBP7□□□□□ -1.29
TRAPPC9-216ENST00000634178 ABCA5Q8WWZ7 1642 aa7□□□□□ -1.29
TRAPPC9-216ENST00000634178 HECW2Q9P2P5 1572 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 ADCY3O60266 1144 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 RFPL3O75679 317 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 PPM1BO75688 479 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 LRIG2O94898 1065 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 UBOX5O94941 541 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 TIAF1O95411 115 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 TP53P04637 393 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 FURINP09958 794 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 NKG7Q16617 165 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 TKFCQ3LXA3 575 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 FBXO41Q8TF61 875 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 ISL2Q96A47 359 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 HAUS7Q99871 368 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 PLVAPQ9BX97 442 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 CEP41Q9BYV8 373 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 MKL2Q9ULH7 1088 aa6.99□□□□□ -1.29
TRAPPC9-216ENST00000634178 ABCA10Q8WWZ4 1543 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms