RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 CREBZFQ9NS37 354 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
MECP2-220ENST00000631210 PDRG1Q9NUG6 133 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 CSADQ9Y600 493 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 PARP14Q460N5 1801 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 NID2Q14112 1375 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 A0A0G2JLL6 359 aaPredicted RBP9.78□□□□□ -0.84
MECP2-220ENST00000631210 USP17L10C9JJH3 530 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 F5H6K3 240 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 CXCL11O14625 94 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 NDUFB10O96000 172 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 BACE1P56817 501 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 KLRC3Q07444 240 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 APOBRQ0VD83 1088 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 MTMR2Q13614 643 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 WTAPQ15007 396 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 CCDC178Q5BJE1 867 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 GPAT2Q6NUI2 795 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 APOA5Q6Q788 366 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 PRRT2Q7Z6L0 340 aaPredicted RBP9.78□□□□□ -0.84
MECP2-220ENST00000631210 GMCL1P1Q8NEA9 526 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 UBAC1Q9BSL1 405 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 VCPKMTQ9H867 229 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 PICK1Q9NRD5 415 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 STX8Q9UNK0 236 aa9.78□□□□□ -0.84
MECP2-220ENST00000631210 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
MECP2-220ENST00000631210 TRIM75PA6NK02 468 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 PDHBP11177 359 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 RXRAP19793 462 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 PDIA3P30101 505 aaKnown RBP9.77□□□□□ -0.85
MECP2-220ENST00000631210 HMGCS2P54868 508 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 C1QTNF8P60827 252 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 IFIT1BQ5T764 474 aaKnown RBP9.77□□□□□ -0.85
MECP2-220ENST00000631210 CYP4F22Q6NT55 531 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 RAB11FIP4Q86YS3 637 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 ZNF654Q8IZM8 581 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 NUP88Q99567 741 aaPredicted RBP9.77□□□□□ -0.85
MECP2-220ENST00000631210 PTPN18Q99952 460 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
MECP2-220ENST00000631210 MAD2L2Q9UI95 211 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 THSD7BQ9C0I4 1608 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 CEP350Q5VT06 3117 aa9.77□□□□□ -0.85
MECP2-220ENST00000631210 KLF18A0A0U1RQI7 1052 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 ZBTB48P10074 688 aaPredicted RBP9.76□□□□□ -0.85
MECP2-220ENST00000631210 VCAM1P19320 739 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 CDC27P30260 824 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 ZNF157P51786 506 aaPredicted RBP9.76□□□□□ -0.85
MECP2-220ENST00000631210 ATP2B2Q01814 1243 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 FUT2Q10981 343 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 MKRN3Q13064 507 aaKnown RBP9.76□□□□□ -0.85
MECP2-220ENST00000631210 GRM4Q14833 912 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 ZYXQ15942 572 aaKnown RBP9.76□□□□□ -0.85
MECP2-220ENST00000631210 ME3Q16798 604 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 TREML2Q5T2D2 321 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 TTBK2Q6IQ55 1244 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 NBPF11Q86T75 865 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 SPICE1Q8N0Z3 855 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 STAG2Q8N3U4 1231 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 AS3MTQ9HBK9 375 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
MECP2-220ENST00000631210 ABT1Q9ULW3 272 aaKnown RBP9.76□□□□□ -0.85
MECP2-220ENST00000631210 BAZ2BQ9UIF8 2168 aaKnown RBP9.75□□□□□ -0.85
MECP2-220ENST00000631210 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
MECP2-220ENST00000631210 C19orf81C9J6K1 198 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 CYTH3O43739 400 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 DTNBO60941 627 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 AOC2O75106 756 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 DDAH1O94760 285 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 RCAN1P53805 252 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 SART3Q15020 963 aaKnown RBP9.75□□□□□ -0.85
MECP2-220ENST00000631210 NTRK3Q16288 839 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 DEFB115Q30KQ5 88 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 SLFN13Q68D06 897 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 TMTC2Q8N394 836 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 SNX21Q969T3 373 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 CHMP4CQ96CF2 233 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 ZNF274Q96GC6 653 aaPredicted RBP9.75□□□□□ -0.85
MECP2-220ENST00000631210 MAP3K14Q99558 947 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 CPVLQ9H3G5 476 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
MECP2-220ENST00000631210 PCNTO95613 3336 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 A0A0G2JMZ2 1700 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 SMCHD1A6NHR9 2005 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 ERICH2A1L162 156 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 CCDC69A6NI79 296 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 BTBD19C9JJ37 291 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 IGF2BP3O00425 579 aaKnown RBP eCLIP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms