RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
DDX49-214ENST00000629999 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
DDX49-214ENST00000629999 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
DDX49-214ENST00000629999 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
DDX49-214ENST00000629999 CERKLQ49MI3 558 aaPredicted RBP17.03■□□□□ 0.32
DDX49-214ENST00000629999 SYT17Q9BSW7 474 aa17.03■□□□□ 0.32
DDX49-214ENST00000629999 FTOQ9C0B1 505 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX49-214ENST00000629999 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
DDX49-214ENST00000629999 CNTNAP1P78357 1384 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 IGKV6D-41A0A0C4DH26 115 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
DDX49-214ENST00000629999 GDF11O95390 407 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 GOLGA8HP0CJ92 632 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
DDX49-214ENST00000629999 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
DDX49-214ENST00000629999 CLIP2Q9UDT6 1046 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 MAD2L2Q9UI95 211 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 KCNJ14Q9UNX9 436 aa17.02■□□□□ 0.32
DDX49-214ENST00000629999 TTLL1O95922 423 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 PKN1Q16512 942 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 CAVIN1Q6NZI2 390 aaKnown RBP17.02■□□□□ 0.31
DDX49-214ENST00000629999 SAMD7Q7Z3H4 446 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 FAM151AQ8WW52 585 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.31
DDX49-214ENST00000629999 SPATA32Q96LK8 384 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 CCDC17Q96LX7 622 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 TMEM39BQ9GZU3 492 aa17.02■□□□□ 0.31
DDX49-214ENST00000629999 COL2A1P02458 1487 aaPredicted RBP17.01■□□□□ 0.31
DDX49-214ENST00000629999 ZNF280AP59817 542 aaPredicted RBP17.01■□□□□ 0.31
DDX49-214ENST00000629999 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
DDX49-214ENST00000629999 CDAN1Q8IWY9 1227 aa17.01■□□□□ 0.31
DDX49-214ENST00000629999 MAP3K14Q99558 947 aa17.01■□□□□ 0.31
DDX49-214ENST00000629999 SCAND2PQ9GZW5 306 aaPredicted RBP17.01■□□□□ 0.31
DDX49-214ENST00000629999 VPS54Q9P1Q0 977 aa17.01■□□□□ 0.31
DDX49-214ENST00000629999 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
DDX49-214ENST00000629999 MYH6P13533 1939 aa17.01■□□□□ 0.31
DDX49-214ENST00000629999 MYH15Q9Y2K3 1946 aa17■□□□□ 0.31
DDX49-214ENST00000629999 MBD3O95983 291 aa17■□□□□ 0.31
DDX49-214ENST00000629999 PARP1P09874 1014 aaKnown RBP17■□□□□ 0.31
DDX49-214ENST00000629999 LMNB1P20700 586 aa17■□□□□ 0.31
DDX49-214ENST00000629999 NOVP48745 357 aa17■□□□□ 0.31
DDX49-214ENST00000629999 GSE1Q14687 1217 aa17■□□□□ 0.31
DDX49-214ENST00000629999 TBC1D10BQ4KMP7 808 aaPredicted RBP17■□□□□ 0.31
DDX49-214ENST00000629999 TATDN1Q6P1N9 297 aa17■□□□□ 0.31
DDX49-214ENST00000629999 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
DDX49-214ENST00000629999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17■□□□□ 0.31
DDX49-214ENST00000629999 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
DDX49-214ENST00000629999 UTRNP46939 3433 aa17■□□□□ 0.31
DDX49-214ENST00000629999 USP17L5A8MUK1 530 aa17■□□□□ 0.31
DDX49-214ENST00000629999 MMP1P03956 469 aa17■□□□□ 0.31
DDX49-214ENST00000629999 GNAQP50148 359 aa17■□□□□ 0.31
DDX49-214ENST00000629999 BRAPQ7Z569 592 aa17■□□□□ 0.31
DDX49-214ENST00000629999 LEO1Q8WVC0 666 aaPredicted RBP17■□□□□ 0.31
DDX49-214ENST00000629999 ZNF396Q96N95 335 aaPredicted RBP17■□□□□ 0.31
DDX49-214ENST00000629999 USP28Q96RU2 1077 aa17■□□□□ 0.31
DDX49-214ENST00000629999 CPVLQ9H3G5 476 aa17■□□□□ 0.31
DDX49-214ENST00000629999 CFAP45Q9UL16 551 aa17■□□□□ 0.31
DDX49-214ENST00000629999 FRMPD2Q68DX3 1309 aaPredicted RBP16.99■□□□□ 0.31
DDX49-214ENST00000629999 UBE2HP62256 183 aa16.99■□□□□ 0.31
DDX49-214ENST00000629999 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX49-214ENST00000629999 ABCB5Q2M3G0 1257 aa16.99■□□□□ 0.31
DDX49-214ENST00000629999 DPF2Q92785 391 aa16.99■□□□□ 0.31
DDX49-214ENST00000629999 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
DDX49-214ENST00000629999 PALM3A6NDB9 673 aaPredicted RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 KLRF2D3W0D1 207 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 RAD21O60216 631 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 XBP1P17861 261 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 SEPT2Q15019 361 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 FKBP1CQ5VVH2 108 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 MYSM1Q5VVJ2 828 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 DIS3L2Q8IYB7 885 aaKnown RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 BAZ2BQ9UIF8 2168 aaKnown RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 BTBD18B2RXH4 712 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 PDHBP11177 359 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 SCG2P13521 617 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 YBX3P16989 372 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■□□□□ 8.6
DDX49-214ENST00000629999 RRP1BQ14684 758 aaKnown RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 TMEM132AQ24JP5 1023 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
DDX49-214ENST00000629999 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
DDX49-214ENST00000629999 CYTH3O43739 400 aa16.97■□□□□ 0.31
DDX49-214ENST00000629999 GH2P01242 217 aa16.97■□□□□ 0.31
DDX49-214ENST00000629999 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
DDX49-214ENST00000629999 ICA1Q05084 483 aa16.97■□□□□ 0.31
DDX49-214ENST00000629999 PFKFB3Q16875 520 aaPredicted RBP16.97■□□□□ 0.31
DDX49-214ENST00000629999 TMEM179Q6ZVK1 233 aa16.97■□□□□ 0.31
DDX49-214ENST00000629999 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
DDX49-214ENST00000629999 ELP1O95163 1332 aa16.97■□□□□ 0.31
DDX49-214ENST00000629999 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
DDX49-214ENST00000629999 TNNI2P48788 182 aa16.96■□□□□ 0.31
DDX49-214ENST00000629999 JAG1P78504 1218 aa16.96■□□□□ 0.31
DDX49-214ENST00000629999 OXER1Q8TDS5 423 aa16.96■□□□□ 0.31
DDX49-214ENST00000629999 GPKOWQ92917 476 aaPredicted RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms