RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 TFAP4Q01664 338 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 TRDNQ13061 729 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 TAF1CQ15572 869 aaPredicted RBP9.5□□□□□ -0.89
CHD2-213ENST00000628118 RNF20Q5VTR2 975 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 GPAT2Q6NUI2 795 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 MKL1Q969V6 931 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 TTC14Q96N46 770 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 LSG1Q9H089 658 aaKnown RBP9.5□□□□□ -0.89
CHD2-213ENST00000628118 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 SMIM22K7EJ46 135 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 FOXN1O15353 648 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 TLR2O60603 784 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 PRDM1O75626 825 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 HSPA8P11142 646 aaKnown RBP9.49□□□□□ -0.89
CHD2-213ENST00000628118 EEF2P13639 858 aaKnown RBP9.49□□□□□ -0.89
CHD2-213ENST00000628118 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
CHD2-213ENST00000628118 NOVP48745 357 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 HAND2P61296 217 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 PTH1RQ03431 593 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 ARHGEF6Q15052 776 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 CCDC84Q86UT8 332 aaPredicted RBP9.49□□□□□ -0.89
CHD2-213ENST00000628118 IQCA1Q86XH1 822 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 TBC1D10CQ8IV04 446 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 STK11IPQ8N1F8 1099 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 MS4A3Q96HJ5 214 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 MTA3Q9BTC8 594 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.49□□□□□ -0.89
CHD2-213ENST00000628118 VCPKMTQ9H867 229 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 TOMM22Q9NS69 142 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 EMILIN3Q9NT22 766 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 MTMR4Q9NYA4 1195 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.49□□□□□ -0.89
CHD2-213ENST00000628118 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 RBM8AQ9Y5S9 174 aaKnown RBP9.49□□□□□ -0.89
CHD2-213ENST00000628118 CEP350Q5VT06 3117 aa9.49□□□□□ -0.89
CHD2-213ENST00000628118 WDR46O15213 610 aaKnown RBP9.48□□□□□ -0.89
CHD2-213ENST00000628118 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
CHD2-213ENST00000628118 CYP21A2P08686 494 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 IRX3P78415 501 aaPredicted RBP9.48□□□□□ -0.89
CHD2-213ENST00000628118 CRHR2Q13324 411 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 NECTIN1Q15223 517 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 SHROOM1Q2M3G4 852 aaPredicted RBP9.48□□□□□ -0.89
CHD2-213ENST00000628118 RRP12Q5JTH9 1297 aaKnown RBP9.48□□□□□ -0.89
CHD2-213ENST00000628118 DGKHQ86XP1 1220 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 SIAH1Q8IUQ4 282 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 GMCL1P1Q8NEA9 526 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 NCOA7Q8NI08 942 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 ACER1Q8TDN7 264 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 CEP95Q96GE4 821 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 MYPNQ86TC9 1320 aa9.48□□□□□ -0.89
CHD2-213ENST00000628118 MYH4Q9Y623 1939 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 A0A1W2PRG0 241 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 GPR25O00155 361 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 FKTNO75072 461 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 TBC1D8O95759 1140 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 ZKSCAN1P17029 563 aaPredicted RBP9.47□□□□□ -0.89
CHD2-213ENST00000628118 VCAM1P19320 739 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 ATP2B2Q01814 1243 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 KRT32Q14532 448 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 TSGA10IPQ3SY00 556 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 FAM47AQ5JRC9 791 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 RCSD1Q6JBY9 416 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 LBX2Q6XYB7 198 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 CATSPERGQ6ZRH7 1159 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 RALYLQ86SE5 291 aaKnown RBP9.47□□□□□ -0.89
CHD2-213ENST00000628118 SMCR8Q8TEV9 937 aaPredicted RBP9.47□□□□□ -0.89
CHD2-213ENST00000628118 ANKS1AQ92625 1134 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 ERO1AQ96HE7 468 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 HOXC10Q9NYD6 342 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 CLIP2Q9UDT6 1046 aa9.47□□□□□ -0.89
CHD2-213ENST00000628118 F5H6K3 240 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 GNRH1P01148 92 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 TOP1P11387 765 aaKnown RBP9.46□□□□□ -0.9
CHD2-213ENST00000628118 LBX1P52954 281 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 SP3Q02447 781 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 KLRC3Q07444 240 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 SART3Q15020 963 aaKnown RBP9.46□□□□□ -0.9
CHD2-213ENST00000628118 FAM110CQ1W6H9 321 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 TREML2Q5T2D2 321 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 CREB3L3Q68CJ9 461 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 LHX8Q68G74 356 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 C17orf99Q6UX52 265 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 MB21D1Q8N884 522 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 UBAC1Q9BSL1 405 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 ASCC2Q9H1I8 757 aaPredicted RBP9.46□□□□□ -0.9
CHD2-213ENST00000628118 IL17RBQ9NRM6 502 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms