RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 FNBP4Q8N3X1 1017 aaPredicted RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 KBTBD3Q8NAB2 608 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 WDR62O43379 1518 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 CHL1O00533 1208 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 LMNAP02545 664 aaKnown RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 ANXA1P04083 346 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 GJC1P36383 396 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 COPS6Q7L5N1 327 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 RETREG2Q8NC44 543 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 MGARPQ8TDB4 240 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 GRK7Q8WTQ7 553 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 RXRAP19793 462 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 NBPF10Q6P3W6 841 aaKnown RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 EMBQ6PCB8 327 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 KLHL29Q96CT2 875 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 YY1AP1Q9H869 796 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 HGSO14964 777 aaPredicted RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 GAS8O95995 478 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 GUCY2DQ02846 1103 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 UAP1Q16222 522 aaPredicted RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 APPBP2Q92624 585 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 CTTNBP2NLQ9P2B4 639 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 KCNK3O14649 394 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 NR1D1P20393 614 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 HSPA1LP34931 641 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 KCTD16Q68DU8 428 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 CCDC13Q8IYE1 715 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 IMPG2Q9BZV3 1241 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 SPZ1Q9BXG8 430 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 STX8Q9UNK0 236 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 MAPK8IP1Q9UQF2 711 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 CREB3O43889 395 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 FAM69CQ0P6D2 419 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 OTUD7BQ6GQQ9 843 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 KDM5AP29375 1690 aaKnown RBP9.83□□□□□ -0.84
VCL-206ENST00000623461 PSD3Q9NYI0 1048 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 RCOR1Q9UKL0 485 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 SBNO2Q9Y2G9 1366 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 LOC102724159A0A0B4J2E5 919 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 DRP2Q13474 957 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 PWP2Q15269 919 aaKnown RBP9.83□□□□□ -0.84
VCL-206ENST00000623461 AFAP1L2Q8N4X5 818 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 PNMA6EA0A0J9YXQ4 647 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 DNAJC8O75937 253 aaPredicted RBP9.83□□□□□ -0.84
VCL-206ENST00000623461 IL9RQ01113 521 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 LIN9Q5TKA1 542 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 LSG1Q9H089 658 aaKnown RBP9.83□□□□□ -0.84
VCL-206ENST00000623461 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 E7EWF7 191 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 COPB1P53618 953 aaKnown RBP9.83□□□□□ -0.84
VCL-206ENST00000623461 EIF3BP55884 814 aaKnown RBP9.83□□□□□ -0.84
VCL-206ENST00000623461 BBOF1Q8ND07 529 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 CENPKQ9BS16 269 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 C19orf44Q9H6X5 657 aa9.83□□□□□ -0.84
VCL-206ENST00000623461 KDM5BQ9UGL1 1544 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 SBNO1A3KN83 1393 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 NBPF6Q5VWK0 638 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 G2E3Q7L622 706 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 NBPF4Q96M43 638 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 PLIN2Q99541 437 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 CXorf56Q9H5V9 222 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 POLR3EQ9NVU0 708 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 ITIH3Q06033 890 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 SUFUQ9UMX1 484 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 A0A1W2PP64 1363 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 ACEP12821 1306 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 KRT24Q2M2I5 525 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 MUM1L1Q5H9M0 696 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 HIBCHQ6NVY1 386 aaPredicted RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 TEX2Q8IWB9 1127 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 COMMD10Q9Y6G5 202 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 B4E1Z4 1266 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 GLE1Q53GS7 698 aaKnown RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 MAK16Q9BXY0 300 aaKnown RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 OSBPL5Q9H0X9 879 aaPredicted RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 BATF3Q9NR55 127 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 ABCC1P33527 1531 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 CASP14P31944 242 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 PHBP35232 272 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 POLE2P56282 527 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 RBL2Q08999 1139 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 PIK3AP1Q6ZUJ8 805 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 PROSER2Q86WR7 435 aaPredicted RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 GSDMBQ8TAX9 411 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 BPIFA3Q9BQP9 254 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 NSFL1CQ9UNZ2 370 aaKnown RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 BAG2O95816 211 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
VCL-206ENST00000623461 AMOTL2Q9Y2J4 779 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 FLT4P35916 1363 aa9.82□□□□□ -0.84
VCL-206ENST00000623461 A2MP01023 1474 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 ATP5JP18859 108 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 SMC1BQ8NDV3 1235 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 MAP3K7O43318 606 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 733.9 ms