RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 NR1I2O75469 434 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.39
ATRX-211ENST00000623321 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
ATRX-211ENST00000623321 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
ATRX-211ENST00000623321 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.46■□□□□ 0.39
ATRX-211ENST00000623321 LUZP1Q86V48 1076 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
ATRX-211ENST00000623321 CKAP2LQ8IYA6 745 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 C17orf53Q8N3J3 647 aaPredicted RBP17.46■□□□□ 0.39
ATRX-211ENST00000623321 BICD2Q8TD16 824 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 DDX11Q96FC9 970 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 KIF3AQ9Y496 699 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 ATRNL1Q5VV63 1379 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.39
ATRX-211ENST00000623321 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.39
ATRX-211ENST00000623321 RCSD1Q6JBY9 416 aa17.46■□□□□ 0.38
ATRX-211ENST00000623321 FAM217BQ9NTX9 383 aaPredicted RBP17.46■□□□□ 0.38
ATRX-211ENST00000623321 CNOT7Q9UIV1 285 aaKnown RBP17.46■□□□□ 0.38
ATRX-211ENST00000623321 PYCARDQ9ULZ3 195 aa17.46■□□□□ 0.38
ATRX-211ENST00000623321 CCDC196A0A1B0GTZ2 297 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CDKL5O76039 1030 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CALM1P0DP23 149 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CALM2P0DP24 149 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CALM3P0DP25 149 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CDC27P30260 824 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CCDC144CPQ8IYA2 1237 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
ATRX-211ENST00000623321 FANCBQ8NB91 859 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 NUP133Q8WUM0 1156 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 FAM151AQ8WW52 585 aa17.45■□□□□ 0.38
ATRX-211ENST00000623321 DDAH1O94760 285 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 SHMT1P34896 483 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 RTN1Q16799 776 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 NBPF9Q3BBW0 867 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
ATRX-211ENST00000623321 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 SBF1O95248 1867 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 TROAPQ12815 778 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 NTRK3Q16288 839 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 FAM83AQ86UY5 434 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 GPC2Q8N158 579 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 SPC24Q8NBT2 197 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 CCDC17Q96LX7 622 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 VEZTQ9HBM0 779 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
ATRX-211ENST00000623321 CTAGE5O15320 804 aa17.43■□□□□ 0.38
ATRX-211ENST00000623321 FDPSP14324 419 aaKnown RBP17.43■□□□□ 0.38
ATRX-211ENST00000623321 ZNF75DP51815 510 aa17.43■□□□□ 0.38
ATRX-211ENST00000623321 RBM26Q5T8P6 1007 aaKnown RBP17.43■□□□□ 0.38
ATRX-211ENST00000623321 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
ATRX-211ENST00000623321 PLIN4Q96Q06 1357 aa17.43■□□□□ 0.38
ATRX-211ENST00000623321 AKR1B1P15121 316 aa17.42■□□□□ 0.38
ATRX-211ENST00000623321 NOVP48745 357 aa17.42■□□□□ 0.38
ATRX-211ENST00000623321 CSRNP1Q96S65 589 aa17.42■□□□□ 0.38
ATRX-211ENST00000623321 DNAJC18Q9H819 358 aa17.42■□□□□ 0.38
ATRX-211ENST00000623321 ORC3Q9UBD5 711 aaPredicted RBP17.42■□□□□ 0.38
ATRX-211ENST00000623321 STX8Q9UNK0 236 aa17.42■□□□□ 0.38
ATRX-211ENST00000623321 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
ATRX-211ENST00000623321 H7C1D1 291 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 IFNAR1P17181 557 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 PTGS1P23219 599 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 CDC25BP30305 580 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 ZNF165P49910 485 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 CEP95Q96GE4 821 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATRX-211ENST00000623321 RBM28Q9NW13 759 aaKnown RBP17.41■□□□□ 0.38
ATRX-211ENST00000623321 RNF181Q9P0P0 153 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 SIPA1L1O43166 1804 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 PPFIA3O75145 1194 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 EGFRP00533 1210 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 TNNI2P48788 182 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 ZNF396Q96N95 335 aaPredicted RBP17.41■□□□□ 0.38
ATRX-211ENST00000623321 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
ATRX-211ENST00000623321 HERC5Q9UII4 1024 aaKnown RBP17.41■□□□□ 0.38
ATRX-211ENST00000623321 MYH8P13535 1937 aa17.4■□□□□ 0.38
ATRX-211ENST00000623321 IGKV6D-41A0A0C4DH26 115 aa17.4■□□□□ 0.38
ATRX-211ENST00000623321 CERKLQ49MI3 558 aaPredicted RBP17.4■□□□□ 0.38
ATRX-211ENST00000623321 TBC1D10BQ4KMP7 808 aaPredicted RBP17.4■□□□□ 0.38
ATRX-211ENST00000623321 DNAJC25Q9H1X3 360 aa17.4■□□□□ 0.38
ATRX-211ENST00000623321 GPRC5DQ9NZD1 345 aa17.4■□□□□ 0.38
ATRX-211ENST00000623321 SLURP2P0DP57 97 aa17.39■□□□□ 0.38
ATRX-211ENST00000623321 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.38
ATRX-211ENST00000623321 KIF4BQ2VIQ3 1234 aa17.39■□□□□ 0.38
ATRX-211ENST00000623321 SARM1Q6SZW1 724 aa17.39■□□□□ 0.38
ATRX-211ENST00000623321 CTCFLQ8NI51 663 aaPredicted RBP17.39■□□□□ 0.38
ATRX-211ENST00000623321 PHKBQ93100 1093 aa17.39■□□□□ 0.38
ATRX-211ENST00000623321 MTMR4Q9NYA4 1195 aa17.39■□□□□ 0.38
ATRX-211ENST00000623321 STK36Q9NRP7 1315 aa17.39■□□□□ 0.37
ATRX-211ENST00000623321 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms