RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 ZMYM1Q5SVZ6 1142 aa34.65■■■■□ 3.14
SEMA3B-215ENST00000621029 POTEEQ6S8J3 1075 aa34.65■■■■□ 3.14
SEMA3B-215ENST00000621029 SPICE1Q8N0Z3 855 aa34.65■■■■□ 3.14
SEMA3B-215ENST00000621029 EVI5LQ96CN4 794 aa34.65■■■■□ 3.14
SEMA3B-215ENST00000621029 RAD21O60216 631 aa34.64■■■■□ 3.14
SEMA3B-215ENST00000621029 SIAH1Q8IUQ4 282 aa34.64■■■■□ 3.14
SEMA3B-215ENST00000621029 IFNL3Q8IZI9 196 aa34.64■■■■□ 3.14
SEMA3B-215ENST00000621029 LPAR1Q92633 364 aa34.64■■■■□ 3.14
SEMA3B-215ENST00000621029 SPDYE16A6NNV3 312 aaPredicted RBP34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 EEF2P13639 858 aaKnown RBP34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 COG2Q14746 738 aa34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 PRPF38BQ5VTL8 546 aaKnown RBP34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 SAMD1Q6SPF0 538 aaPredicted RBP34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 GPR142Q7Z601 462 aa34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 PLEKHH3Q7Z736 793 aa34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 SOCS4Q8WXH5 440 aa34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 HOXC10Q9NYD6 342 aa34.63■■■■□ 3.13
SEMA3B-215ENST00000621029 MYH8P13535 1937 aa34.62■■■■□ 3.13
SEMA3B-215ENST00000621029 CNMDO75829 334 aa34.62■■■■□ 3.13
SEMA3B-215ENST00000621029 KIAA1755Q5JYT7 1200 aa34.62■■■■□ 3.13
SEMA3B-215ENST00000621029 NAPBQ9H115 298 aa34.62■■■■□ 3.13
SEMA3B-215ENST00000621029 VCPKMTQ9H867 229 aa34.62■■■■□ 3.13
SEMA3B-215ENST00000621029 ZNF287Q9HBT7 754 aa34.62■■■■□ 3.13
SEMA3B-215ENST00000621029 IGHDP01880 384 aa34.61■■■■□ 3.13
SEMA3B-215ENST00000621029 HMGCRP04035 888 aa34.61■■■■□ 3.13
SEMA3B-215ENST00000621029 GJA8P48165 433 aa34.61■■■■□ 3.13
SEMA3B-215ENST00000621029 SMC5Q8IY18 1101 aa34.61■■■■□ 3.13
SEMA3B-215ENST00000621029 BTBD7Q9P203 1132 aa34.61■■■■□ 3.13
SEMA3B-215ENST00000621029 RASA1P20936 1047 aa34.6■■■■□ 3.13
SEMA3B-215ENST00000621029 LBX2Q6XYB7 198 aa34.6■■■■□ 3.13
SEMA3B-215ENST00000621029 ZNF444Q8N0Y2 327 aaPredicted RBP34.6■■■■□ 3.13
SEMA3B-215ENST00000621029 U2AF1L4Q8WU68 220 aaKnown RBP34.6■■■■□ 3.13
SEMA3B-215ENST00000621029 FLOT1O75955 427 aa34.59■■■■□ 3.13
SEMA3B-215ENST00000621029 CCDC129Q6ZRS4 1044 aa34.59■■■■□ 3.13
SEMA3B-215ENST00000621029 SHISA4Q96DD7 197 aa34.59■■■■□ 3.13
SEMA3B-215ENST00000621029 GOPCQ9HD26 462 aa34.59■■■■□ 3.13
SEMA3B-215ENST00000621029 DOCK3Q8IZD9 2030 aa34.59■■■■□ 3.13
SEMA3B-215ENST00000621029 TRIM6-TRIM34B2RNG4 842 aa34.58■■■■□ 3.13
SEMA3B-215ENST00000621029 PRDM1O75626 825 aa34.58■■■■□ 3.13
SEMA3B-215ENST00000621029 SLC3A2P08195 630 aaKnown RBP34.58■■■■□ 3.13
SEMA3B-215ENST00000621029 DEFB118Q96PH6 123 aa34.58■■■■□ 3.13
SEMA3B-215ENST00000621029 ROBO3Q96MS0 1386 aa34.58■■■■□ 3.13
SEMA3B-215ENST00000621029 TFRCP02786 760 aaKnown RBP34.57■■■■□ 3.12
SEMA3B-215ENST00000621029 RGS2P41220 211 aa34.57■■■■□ 3.12
SEMA3B-215ENST00000621029 CHD1LQ86WJ1 897 aa34.57■■■■□ 3.12
SEMA3B-215ENST00000621029 IVNS1ABPQ9Y6Y0 642 aa34.57■■■■□ 3.12
SEMA3B-215ENST00000621029 WDR46O15213 610 aaKnown RBP34.56■■■■□ 3.12
SEMA3B-215ENST00000621029 SGPL1O95470 568 aa34.56■■■■□ 3.12
SEMA3B-215ENST00000621029 TRIB2Q92519 343 aa34.56■■■■□ 3.12
SEMA3B-215ENST00000621029 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.56■■■■□ 3.12
SEMA3B-215ENST00000621029 BRCA2P51587 3418 aa34.56■■■■□ 3.12
SEMA3B-215ENST00000621029 ZKSCAN1P17029 563 aaPredicted RBP34.55■■■■□ 3.12
SEMA3B-215ENST00000621029 PDE4BQ07343 736 aa34.55■■■■□ 3.12
SEMA3B-215ENST00000621029 TRIM32Q13049 653 aa34.55■■■■□ 3.12
SEMA3B-215ENST00000621029 PLS1Q14651 629 aa34.55■■■■□ 3.12
SEMA3B-215ENST00000621029 RILPL2Q969X0 211 aa34.55■■■■□ 3.12
SEMA3B-215ENST00000621029 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.55■■■■□ 3.12
SEMA3B-215ENST00000621029 XRCC5P13010 732 aaKnown RBP34.54■■■■□ 3.12
SEMA3B-215ENST00000621029 DSG3P32926 999 aa34.54■■■■□ 3.12
SEMA3B-215ENST00000621029 MORN1Q5T089 497 aa34.54■■■■□ 3.12
SEMA3B-215ENST00000621029 TRMT44Q8IYL2 757 aaKnown RBP34.54■■■■□ 3.12
SEMA3B-215ENST00000621029 HMX1Q9NP08 348 aaPredicted RBP34.54■■■■□ 3.12
SEMA3B-215ENST00000621029 NUCB1Q02818 461 aa34.53■■■■□ 3.12
SEMA3B-215ENST00000621029 PPARAQ07869 468 aa34.53■■■■□ 3.12
SEMA3B-215ENST00000621029 MB21D1Q8N884 522 aa34.53■■■■□ 3.12
SEMA3B-215ENST00000621029 ATG4CQ96DT6 458 aa34.53■■■■□ 3.12
SEMA3B-215ENST00000621029 HELLSQ9NRZ9 838 aa34.53■■■■□ 3.12
SEMA3B-215ENST00000621029 MAP2K5Q13163 448 aa34.52■■■■□ 3.12
SEMA3B-215ENST00000621029 APBA2Q99767 749 aa34.52■■■■□ 3.12
SEMA3B-215ENST00000621029 PAK6Q9NQU5 681 aaPredicted RBP34.52■■■■□ 3.12
SEMA3B-215ENST00000621029 CLIP2Q9UDT6 1046 aa34.52■■■■□ 3.12
SEMA3B-215ENST00000621029 SLC15A5A6NIM6 579 aa34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 PTPREP23469 700 aa34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 IRX6P78412 446 aaPredicted RBP34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 USP6NLQ92738 828 aa34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 MOV10L1Q9BXT6 1211 aaKnown RBP34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 SPATC1LQ9H0A9 340 aa34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 NYAP2Q9P242 653 aa34.51■■■■□ 3.12
SEMA3B-215ENST00000621029 RPTORQ8N122 1335 aa34.51■■■■□ 3.11
SEMA3B-215ENST00000621029 FARP2O94887 1054 aaPredicted RBP34.5■■■■□ 3.11
SEMA3B-215ENST00000621029 TSPY3P0CV98 308 aa34.5■■■■□ 3.11
SEMA3B-215ENST00000621029 TSPY8P0CW00 308 aa34.5■■■■□ 3.11
SEMA3B-215ENST00000621029 FAM83BQ5T0W9 1011 aa34.5■■■■□ 3.11
SEMA3B-215ENST00000621029 FAM227BQ96M60 508 aa34.5■■■■□ 3.11
SEMA3B-215ENST00000621029 PRKAR2AP13861 404 aaKnown RBP34.49■■■■□ 3.11
SEMA3B-215ENST00000621029 CCL14Q16627 93 aa34.49■■■■□ 3.11
SEMA3B-215ENST00000621029 MCMDC2Q4G0Z9 681 aa34.48■■■■□ 3.11
SEMA3B-215ENST00000621029 VPS53Q5VIR6 699 aa34.48■■■■□ 3.11
SEMA3B-215ENST00000621029 PLEKHM2Q8IWE5 1019 aa34.48■■■■□ 3.11
SEMA3B-215ENST00000621029 FBXO28Q9NVF7 368 aa34.48■■■■□ 3.11
SEMA3B-215ENST00000621029 PLXNB2O15031 1838 aa34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 ERCC3P19447 782 aa34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 FAM47AQ5JRC9 791 aa34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 NCAPG2Q86XI2 1143 aa34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 DPF3Q92784 378 aa34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 CEP95Q96GE4 821 aa34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 NUP88Q99567 741 aaPredicted RBP34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 MKI67P46013 3256 aaKnown RBP34.47■■■■□ 3.11
SEMA3B-215ENST00000621029 A0A0D9SFI3 127 aa34.46■■■■□ 3.11
SEMA3B-215ENST00000621029 F5H6K3 240 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms