RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 ZMYND8Q9ULU4 1186 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-221ENST00000619555 LAMA3Q16787 3333 aa13.48□□□□□ -0.25
TARDBP-221ENST00000619555 CYP2D7A0A087X1C5 515 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
TARDBP-221ENST00000619555 AKR1B1P15121 316 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 PTPREP23469 700 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 LHX8Q68G74 356 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 LBX2Q6XYB7 198 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 SIAH1Q8IUQ4 282 aa13.47□□□□□ -0.25
TARDBP-221ENST00000619555 CHMP4BQ9H444 224 aaKnown RBP13.47□□□□□ -0.25
TARDBP-221ENST00000619555 SLC15A5A6NIM6 579 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 COG2Q14746 738 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 TMEM179Q6ZVK1 233 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.252e-12■□□□□ 8.7
TARDBP-221ENST00000619555 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 MYH8P13535 1937 aa13.46□□□□□ -0.25
TARDBP-221ENST00000619555 PFASO15067 1338 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 MYH7P12883 1935 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 RLFQ13129 1914 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 USP17L21D6R901 530 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 CDK8P49336 464 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 GRB14Q14449 540 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 MOV10L1Q9BXT6 1211 aaKnown RBP13.45□□□□□ -0.26
TARDBP-221ENST00000619555 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 TANGO6Q9C0B7 1094 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 HOXC10Q9NYD6 342 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 IVNS1ABPQ9Y6Y0 642 aa13.45□□□□□ -0.26
TARDBP-221ENST00000619555 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-221ENST00000619555 HOXC6P09630 235 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 COL6A1P12109 1028 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 SYN1P17600 705 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 ATP2B2Q01814 1243 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 SPICE1Q8N0Z3 855 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 GDF15Q99988 308 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 PUS7LQ9H0K6 701 aaKnown RBP13.44□□□□□ -0.26
TARDBP-221ENST00000619555 SLC4A4Q9Y6R1 1079 aa13.44□□□□□ -0.26
TARDBP-221ENST00000619555 A0A1W2PPC1 479 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 DSG3P32926 999 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 CYP2C19P33261 490 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 ICA1Q05084 483 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 TRPV1Q8NER1 839 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 SPATC1LQ9H0A9 340 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 ARHGEF10LQ9HCE6 1279 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 TMX2Q9Y320 296 aa13.43□□□□□ -0.26
TARDBP-221ENST00000619555 FLOT1O75955 427 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 ERCC3P19447 782 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 CNGA1P29973 690 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 LRRC26Q2I0M4 334 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
TARDBP-221ENST00000619555 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 DPP9Q86TI2 863 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 AMOTL1Q8IY63 956 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 LPAR1Q92633 364 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
TARDBP-221ENST00000619555 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
TARDBP-221ENST00000619555 COBLO75128 1261 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 IGHA2P01877 340 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
TARDBP-221ENST00000619555 ADORA2AP29274 412 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 BMP8BP34820 402 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-221ENST00000619555 PLS1Q14651 629 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 TSHZ3Q63HK5 1081 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 SHCBP1Q8NEM2 672 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
TARDBP-221ENST00000619555 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 SH2D4AQ9H788 454 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 DDX20Q9UHI6 824 aaKnown RBP13.41□□□□□ -0.26
TARDBP-221ENST00000619555 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
TARDBP-221ENST00000619555 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
TARDBP-221ENST00000619555 A0A0G2JMZ2 1700 aa13.4□□□□□ -0.26
TARDBP-221ENST00000619555 WDR46O15213 610 aaKnown RBP13.4□□□□□ -0.26
TARDBP-221ENST00000619555 STRNO43815 780 aa13.4□□□□□ -0.26
TARDBP-221ENST00000619555 NCAPG2Q86XI2 1143 aa13.4□□□□□ -0.26
TARDBP-221ENST00000619555 STK11IPQ8N1F8 1099 aa13.4□□□□□ -0.26
TARDBP-221ENST00000619555 MB21D1Q8N884 522 aa13.4□□□□□ -0.26
TARDBP-221ENST00000619555 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.4□□□□□ -0.26
TARDBP-221ENST00000619555 SENP6Q9GZR1 1112 aaPredicted RBP13.4□□□□□ -0.26
TARDBP-221ENST00000619555 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
TARDBP-221ENST00000619555 PARP14Q460N5 1801 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 DNAH12Q6ZR08 3092 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 SMCHD1A6NHR9 2005 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
TARDBP-221ENST00000619555 CYBAP13498 195 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms