RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 CALCRLQ16602 461 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 KCNJ18B7U540 433 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 YWHAEP62258 255 aaKnown RBP12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 ATP8B2P98198 1209 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 KCNJ12Q14500 433 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 SKIP12755 728 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 ST13P4Q8IZP2 240 aaPredicted RBP12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 TSC22D3Q99576 134 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 GLT8D2Q9H1C3 349 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 PKD2L1Q9P0L9 805 aa12.64□□□□□ -0.39
PCDHA4-204ENST00000618834 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 P4HA1P13674 534 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 CHMLP26374 656 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 CCDC92Q53HC0 331 aaPredicted RBP12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 GRAMD4Q6IC98 578 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 TBC1D7Q9P0N9 293 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 KCNA4P22459 653 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 SP4Q02446 784 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 NACA2Q9H009 215 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 ARHGEF35A5YM69 484 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 ADKP55263 362 aaKnown RBP12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 CNOT10Q9H9A5 744 aaKnown RBP12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 ANLNQ9NQW6 1124 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 MYO1AQ9UBC5 1043 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 ALDH1L1O75891 902 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 TRPA1O75762 1119 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 KMT5BQ4FZB7 885 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 TTC38Q5R3I4 469 aa12.63□□□□□ -0.39
PCDHA4-204ENST00000618834 HNRNPCL2B2RXH8 293 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 KRT10P13645 584 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 SEPT2Q15019 361 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 TAF11Q15544 211 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 USP6NLQ92738 828 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 DESI2Q9BSY9 194 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 XPO4Q9C0E2 1151 aaKnown RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 POLE2P56282 527 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 HDAC11Q96DB2 347 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 HELLSQ9NRZ9 838 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 AOX1Q06278 1338 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 IFNB1P01574 187 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 PRG4Q92954 1404 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 GSTA4O15217 222 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 S100BP04271 92 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 MORC3Q14149 939 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 TRIM50Q86XT4 487 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 GARSP41250 739 aaKnown RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 CWF19L2Q2TBE0 894 aaKnown RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 NBPF14Q5TI25 921 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 NUDCD3Q8IVD9 361 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 TCP11Q8WWU5 503 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 CEP19Q96LK0 163 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 ZFXP17010 805 aaPredicted RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 IL1RL1Q01638 556 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 CCDC138Q96M89 665 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 IPO11Q9UI26 975 aaKnown RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 TRIM37O94972 964 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 E2F5Q15329 346 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 NOC2LQ9Y3T9 749 aaKnown RBP12.62□□□□□ -0.39
PCDHA4-204ENST00000618834 BBOF1Q8ND07 529 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 ANGEL1Q9UNK9 670 aaKnown RBP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 HSPA8P11142 646 aaKnown RBP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 GCC2Q8IWJ2 1684 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 ZBBXA8MT70 800 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 PNOCQ13519 176 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 U2AF1L4Q8WU68 220 aaKnown RBP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 TRIM42Q8IWZ5 723 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 FAM133BQ5BKY9 247 aaKnown RBP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 TMTC4Q5T4D3 741 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 CERS3Q8IU89 383 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 MIGA1Q8NAN2 632 aa12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 ZNF622Q969S3 477 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHA4-204ENST00000618834 PFDN6O15212 129 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 KSR1Q8IVT5 923 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 MYCT1Q8N699 235 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 RIOK1Q9BRS2 568 aaKnown RBP12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 ECE1P42892 770 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 CEP85Q6P2H3 762 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 TEKT2Q9UIF3 430 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms