RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 VWA3AA6NCI4 1184 aa14.21□□□□□ -0.14
CIITA-212ENST00000618207 G3V3G9 751 aa14.21□□□□□ -0.14
CIITA-212ENST00000618207 RCAN1P53805 252 aa14.21□□□□□ -0.14
CIITA-212ENST00000618207 PPP2R5BQ15173 497 aa14.21□□□□□ -0.14
CIITA-212ENST00000618207 DCAF8Q5TAQ9 597 aa14.21□□□□□ -0.14
CIITA-212ENST00000618207 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.14
CIITA-212ENST00000618207 CDC25AP30304 524 aa14.2□□□□□ -0.14
CIITA-212ENST00000618207 XPO4Q9C0E2 1151 aaKnown RBP14.2□□□□□ -0.14
CIITA-212ENST00000618207 UQCRHLA0A096LP55 91 aa14.2□□□□□ -0.14
CIITA-212ENST00000618207 UQCRHP07919 91 aa14.2□□□□□ -0.14
CIITA-212ENST00000618207 NPY5RQ15761 445 aa14.2□□□□□ -0.14
CIITA-212ENST00000618207 CLEC10AQ8IUN9 316 aa14.2□□□□□ -0.14
CIITA-212ENST00000618207 MMP10P09238 476 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 RASA1P20936 1047 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 CDK8P49336 464 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 PTGDRQ13258 359 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 TSC1Q92574 1164 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 C16orf45Q96MC5 204 aaPredicted RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 EYA3Q99504 573 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 ZC3H12CQ9C0D7 883 aaKnown RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 KIF5BP33176 963 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 RBM6P78332 1123 aaKnown RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 TTC38Q5R3I4 469 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 DHX37Q8IY37 1157 aaKnown RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 TRMT44Q8IYL2 757 aaKnown RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 TMEM47Q9BQJ4 181 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 SRPRBQ9Y5M8 271 aaKnown RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 FLT1P17948 1338 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 UTRNP46939 3433 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 A0A087X0B3 334 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 IL1R1P14778 569 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 BMP6P22004 513 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 POSTNQ15063 836 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 USP17L2Q6R6M4 530 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 TMC6Q7Z403 805 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 IPO4Q8TEX9 1081 aaKnown RBP14.19□□□□□ -0.14
CIITA-212ENST00000618207 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
CIITA-212ENST00000618207 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 NCAPHQ15003 741 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 SYMPKQ92797 1274 aaKnown RBP14.18□□□□□ -0.14
CIITA-212ENST00000618207 DBNDD1Q9H9R9 158 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 CYTH3O43739 400 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 TPM3P06753 285 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 PPP4CP60510 307 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 PFKFB3Q16875 520 aaPredicted RBP14.18□□□□□ -0.14
CIITA-212ENST00000618207 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.18□□□□□ -0.14
CIITA-212ENST00000618207 TUBE1Q9UJT0 475 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
CIITA-212ENST00000618207 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
CIITA-212ENST00000618207 LAMB1P07942 1786 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 GPR75-ASB3A0A0A6YYF3 556 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 RAD21O60216 631 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 SERPINC1P01008 464 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 RHBDL3P58872 404 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 SLC35G1Q2M3R5 365 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 KLHL10Q6JEL2 608 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 DGKHQ86XP1 1220 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 MRFAP1L1Q96HT8 127 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 TRMT1Q9NXH9 659 aaKnown RBP14.17□□□□□ -0.14
CIITA-212ENST00000618207 MAD2L2Q9UI95 211 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 DAGLAQ9Y4D2 1042 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 COBLO75128 1261 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 DPP8Q6V1X1 898 aaPredicted RBP14.17□□□□□ -0.14
CIITA-212ENST00000618207 LRRC8AQ8IWT6 810 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 CERS5Q8N5B7 392 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 CEP95Q96GE4 821 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 CRAMP1Q96RY5 1269 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 UBA5Q9GZZ9 404 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 FANCLQ9NW38 375 aa14.17□□□□□ -0.14
CIITA-212ENST00000618207 SRGNP10124 158 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
CIITA-212ENST00000618207 CACNB3P54284 484 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 ATP2B2Q01814 1243 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 DPF2Q92785 391 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 MAN1B1Q9UKM7 699 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 KLRF2D3W0D1 207 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 TPM4P67936 248 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 FANCCQ00597 558 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 GOLGA8FQ08AF8 430 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 GOLGA8DPQ0D2H9 430 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 SMYD4Q8IYR2 804 aaPredicted RBP14.16□□□□□ -0.14
CIITA-212ENST00000618207 RGS22Q8NE09 1264 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 ARID3AQ99856 593 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 PCDHAC2Q9Y5I4 1007 aa14.16□□□□□ -0.14
CIITA-212ENST00000618207 FRMPD2Q68DX3 1309 aaPredicted RBP14.16□□□□□ -0.14
CIITA-212ENST00000618207 SMTNL1A8MU46 457 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 SKILP12757 684 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 STX17P56962 302 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 CFAP100Q494V2 611 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 SP8Q8IXZ3 490 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 BLIDQ8IZY5 108 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 LRRC47Q8N1G4 583 aaKnown RBP14.15□□□□□ -0.14
CIITA-212ENST00000618207 PLIN2Q99541 437 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 MDM2Q00987 491 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms