RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
PDPN-211ENST00000617617 SUPT20HL1Q3ZLR7 823 aa13.66□□□□□ -0.22
PDPN-211ENST00000617617 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
PDPN-211ENST00000617617 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
PDPN-211ENST00000617617 CNTNAP5Q8WYK1 1306 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 ASNSP08243 561 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 DEXIO95424 95 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 ZSCAN22P10073 491 aaPredicted RBP13.65□□□□□ -0.22
PDPN-211ENST00000617617 PDHBP11177 359 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 SSRP1Q08945 709 aaKnown RBP13.65□□□□□ -0.22
PDPN-211ENST00000617617 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 DCPSQ96C86 337 aaKnown RBP13.65□□□□□ -0.22
PDPN-211ENST00000617617 MYL10Q9BUA6 226 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
PDPN-211ENST00000617617 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 JAG1P78504 1218 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 TRIM22Q8IYM9 498 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 RLFQ13129 1914 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 PLA2G6O60733 806 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 EEF2P13639 858 aaKnown RBP13.64□□□□□ -0.23
PDPN-211ENST00000617617 ICA1Q05084 483 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 SEPT2Q15019 361 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
PDPN-211ENST00000617617 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
PDPN-211ENST00000617617 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 ORC3Q9UBD5 711 aaPredicted RBP13.64□□□□□ -0.23
PDPN-211ENST00000617617 TMX2Q9Y320 296 aa13.64□□□□□ -0.23
PDPN-211ENST00000617617 RBBP6Q7Z6E9 1792 aaKnown RBP13.64□□□□□ -0.23
PDPN-211ENST00000617617 FAM196BA6NMK8 535 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 GH2P01242 217 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 MAP3K11Q16584 847 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 ARHGEF10LQ9HCE6 1279 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 WDR18Q9BV38 432 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 RIOX1Q9H6W3 641 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 SH3GLB2Q9NR46 395 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 MPHOSPH10O00566 681 aaKnown RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 RXRAP19793 462 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 ZNF713Q8N859 430 aaPredicted RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 TNPO1Q92973 898 aaKnown RBP13.63□□□□□ -0.23
PDPN-211ENST00000617617 MTMR8Q96EF0 704 aa13.63□□□□□ -0.23
PDPN-211ENST00000617617 F13A1P00488 732 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 PKP1Q13835 747 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 PKN1Q16512 942 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 BTNL9Q6UXG8 535 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 SULF1Q8IWU6 871 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 FBXO18Q8NFZ0 1043 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
PDPN-211ENST00000617617 A0A0G2JMZ2 1700 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 GDF11O95390 407 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 SLURP2P0DP57 97 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 TEX2Q8IWB9 1127 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
PDPN-211ENST00000617617 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
PDPN-211ENST00000617617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDPN-211ENST00000617617 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
PDPN-211ENST00000617617 USP48Q86UV5 1035 aa13.61□□□□□ -0.23
PDPN-211ENST00000617617 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
PDPN-211ENST00000617617 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
PDPN-211ENST00000617617 GOPCQ9HD26 462 aa13.61□□□□□ -0.23
PDPN-211ENST00000617617 USP17L5A8MUK1 530 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
PDPN-211ENST00000617617 SLC35G1Q2M3R5 365 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 ATL3Q6DD88 541 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 KLRF2D3W0D1 207 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 USP2O75604 605 aaPredicted RBP13.6□□□□□ -0.23
PDPN-211ENST00000617617 RESTQ13127 1097 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 STAG2Q8N3U4 1231 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 PHKBQ93100 1093 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 C8orf76Q96K31 380 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 ALG1Q9BT22 464 aa13.6□□□□□ -0.23
PDPN-211ENST00000617617 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
PDPN-211ENST00000617617 C12orf42Q96LP6 360 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 GBP4Q96PP9 640 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 F5H6K3 240 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 CYTH3O43739 400 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
PDPN-211ENST00000617617 PTMSP20962 102 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 KLRC3Q07444 240 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 SLFN13Q68D06 897 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
PDPN-211ENST00000617617 LPAR1Q92633 364 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms