RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 RAD21O60216 631 aa18.95■□□□□ 0.62
SNAP47-213ENST00000617596 VEGFAP15692 232 aaPredicted RBP18.95■□□□□ 0.62
SNAP47-213ENST00000617596 MAP1SQ66K74 1059 aaPredicted RBP18.95■□□□□ 0.62
SNAP47-213ENST00000617596 ZMYND15Q9H091 742 aa18.95■□□□□ 0.62
SNAP47-213ENST00000617596 KANSL2Q9H9L4 492 aa18.95■□□□□ 0.62
SNAP47-213ENST00000617596 DDAH1O94760 285 aa18.94■□□□□ 0.62
SNAP47-213ENST00000617596 PLEKHA8P1O95397 391 aa18.94■□□□□ 0.62
SNAP47-213ENST00000617596 GOLGA8HP0CJ92 632 aa18.94■□□□□ 0.62
SNAP47-213ENST00000617596 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNAP47-213ENST00000617596 ZKSCAN4Q969J2 545 aaPredicted RBP18.94■□□□□ 0.62
SNAP47-213ENST00000617596 NAP1L5Q96NT1 182 aaPredicted RBP18.94■□□□□ 0.62
SNAP47-213ENST00000617596 NTRK3Q16288 839 aa18.94■□□□□ 0.62
SNAP47-213ENST00000617596 STAG2Q8N3U4 1231 aa18.94■□□□□ 0.62
SNAP47-213ENST00000617596 WRNIP1Q96S55 665 aa18.94■□□□□ 0.62
SNAP47-213ENST00000617596 A0A1W2PRG0 241 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 USP17L5A8MUK1 530 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 TPM2P07951 284 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 ECE1P42892 770 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 FOSBP53539 338 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 SUPT20HL1Q3ZLR7 823 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 DCAF15Q66K64 600 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 USP17L2Q6R6M4 530 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 SMARCC2Q8TAQ2 1214 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 ACER1Q8TDN7 264 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 ZNF341Q9BYN7 854 aa18.93■□□□□ 0.62
SNAP47-213ENST00000617596 CWC22Q9HCG8 908 aaKnown RBP18.93■□□□□ 0.62
SNAP47-213ENST00000617596 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
SNAP47-213ENST00000617596 DHX16O60231 1041 aaKnown RBP18.92■□□□□ 0.62
SNAP47-213ENST00000617596 FDPSP14324 419 aaKnown RBP18.92■□□□□ 0.62
SNAP47-213ENST00000617596 FOXD4L5Q5VV16 416 aaPredicted RBP18.92■□□□□ 0.62
SNAP47-213ENST00000617596 NBPF11Q86T75 865 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 CTCFLQ8NI51 663 aaPredicted RBP18.92■□□□□ 0.62
SNAP47-213ENST00000617596 FOXD4L4Q8WXT5 416 aaPredicted RBP18.92■□□□□ 0.62
SNAP47-213ENST00000617596 CDCA5Q96FF9 252 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 CPVLQ9H3G5 476 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 hCG_1642624A0A1W2PR95 340 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 TRAF5O00463 557 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 CALM1P0DP23 149 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 CALM2P0DP24 149 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 CALM3P0DP25 149 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 MCM4P33991 863 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 LLPHQ9BRT6 129 aaKnown RBP18.92■□□□□ 0.62
SNAP47-213ENST00000617596 NYAP2Q9P242 653 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 MAD2L2Q9UI95 211 aa18.92■□□□□ 0.62
SNAP47-213ENST00000617596 NID2Q14112 1375 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 FRMPD2Q68DX3 1309 aaPredicted RBP18.91■□□□□ 0.62
SNAP47-213ENST00000617596 USP2O75604 605 aaPredicted RBP18.91■□□□□ 0.62
SNAP47-213ENST00000617596 RCAN1P53805 252 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 MOB2Q70IA6 237 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 CDC37L1Q7L3B6 337 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 PIBF1Q8WXW3 757 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 KLRG1Q96E93 195 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 SLC26A6Q9BXS9 759 aa18.91■□□□□ 0.62
SNAP47-213ENST00000617596 CTNND1O60716 968 aaKnown RBP18.9■□□□□ 0.62
SNAP47-213ENST00000617596 ASNSP08243 561 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 PDHBP11177 359 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 GRM4Q14833 912 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
SNAP47-213ENST00000617596 SRBD1Q8N5C6 995 aaKnown RBP18.9■□□□□ 0.62
SNAP47-213ENST00000617596 HOOK2Q96ED9 719 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 SYT1P21579 422 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 FAM184AQ8NB25 1140 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 MKL1Q969V6 931 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 AIFM3Q96NN9 605 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 GJB4Q9NTQ9 266 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 CHMP5Q9NZZ3 219 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 ORC3Q9UBD5 711 aaPredicted RBP18.9■□□□□ 0.62
SNAP47-213ENST00000617596 ZNF112Q9UJU3 913 aa18.9■□□□□ 0.62
SNAP47-213ENST00000617596 CCDC196A0A1B0GTZ2 297 aa18.89■□□□□ 0.61
SNAP47-213ENST00000617596 SLC35G1Q2M3R5 365 aa18.89■□□□□ 0.61
SNAP47-213ENST00000617596 LARP1BQ659C4 914 aaKnown RBP18.89■□□□□ 0.61
SNAP47-213ENST00000617596 TMTC3Q6ZXV5 915 aa18.89■□□□□ 0.61
SNAP47-213ENST00000617596 SPICE1Q8N0Z3 855 aa18.89■□□□□ 0.61
SNAP47-213ENST00000617596 PARP1P09874 1014 aaKnown RBP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 IFNAR1P17181 557 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 FUT2Q10981 343 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 DGKZQ13574 1117 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 KIAA1755Q5JYT7 1200 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 KCTD1Q719H9 257 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 NUP88Q99567 741 aaPredicted RBP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 ZNF408Q9H9D4 720 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 GPCPD1Q9NPB8 672 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 RBM28Q9NW13 759 aaKnown RBP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 ZDHHC9Q9Y397 364 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 PALM3A6NDB9 673 aaPredicted RBP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 DDX11L8A8MPP1 907 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 F5H6K3 240 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 KIF5BP33176 963 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 HMGN5P82970 282 aaKnown RBP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 KLRC3Q07444 240 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 SCYL3Q8IZE3 742 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNAP47-213ENST00000617596 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
SNAP47-213ENST00000617596 KLRF2D3W0D1 207 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 PPP1R12BO60237 982 aaPredicted RBP18.87■□□□□ 0.61
SNAP47-213ENST00000617596 CDKL5O76039 1030 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 PTMSP20962 102 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 GUCY1B3Q02153 619 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 SSRP1Q08945 709 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms