RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 STAP2Q9UGK3 403 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 H7C1D1 291 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 PHLDB3Q6NSJ2 640 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 IRX5P78411 483 aaPredicted RBP20.85■□□□□ 0.93
SPAST-203ENST00000615843 NLRP3Q96P20 1036 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 PCDHA5Q9Y5H7 936 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 PLCG2P16885 1265 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 GUCY2DQ02846 1103 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 KRT25Q7Z3Z0 450 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 SCRN1Q12765 414 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 E2F4Q16254 413 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 WDR78Q5VTH9 848 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 NELFCDQ8IXH7 590 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 DNMT1P26358 1616 aaKnown RBP20.85■□□□□ 0.93
SPAST-203ENST00000615843 ENC1O14682 589 aa20.85■□□□□ 0.93
SPAST-203ENST00000615843 SPATS2LQ9NUQ6 558 aaKnown RBP20.85■□□□□ 0.93
SPAST-203ENST00000615843 hCG_1642624A0A1W2PR95 340 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 I3L4J1 428 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 MYO1CO00159 1063 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 DPH6Q7L8W6 267 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 DZIP3Q86Y13 1208 aaKnown RBP20.84■□□□□ 0.93
SPAST-203ENST00000615843 RPSAP08865 295 aaKnown RBP20.84■□□□□ 0.93
SPAST-203ENST00000615843 GCKRQ14397 625 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 LIN9Q5TKA1 542 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 LSM14BQ9BX40 385 aaKnown RBP20.84■□□□□ 0.93
SPAST-203ENST00000615843 DPH5Q9H2P9 285 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 TBC1D7Q9P0N9 293 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 F8W031 263 aaPredicted RBP20.84■□□□□ 0.93
SPAST-203ENST00000615843 TROVE2P10155 538 aaKnown RBP eCLIP20.84■□□□□ 0.93
SPAST-203ENST00000615843 ODF2LQ9ULJ1 636 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 PPP2R5EQ16537 467 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 ZNF804AQ7Z570 1209 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 SMC1BQ8NDV3 1235 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
SPAST-203ENST00000615843 NCKAP5LQ9HCH0 1330 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 EAF2Q96CJ1 260 aaPredicted RBP20.83■□□□□ 0.93
SPAST-203ENST00000615843 A0A087WWV3 80 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 E2F5Q15329 346 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 PUM3Q15397 648 aaKnown RBP20.83■□□□□ 0.93
SPAST-203ENST00000615843 WDR44Q5JSH3 913 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 GAS8O95995 478 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 ITGA6P23229 1130 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 EPHB4P54760 987 aa20.83■□□□□ 0.93
SPAST-203ENST00000615843 PABPN1LA6NDY0 278 aaKnown RBP20.83■□□□□ 0.92
SPAST-203ENST00000615843 SETSIPP0DME0 302 aa20.83■□□□□ 0.92
SPAST-203ENST00000615843 ZAP70P43403 619 aa20.83■□□□□ 0.92
SPAST-203ENST00000615843 COPB1P53618 953 aaKnown RBP20.83■□□□□ 0.92
SPAST-203ENST00000615843 PPP1R21Q6ZMI0 780 aa20.83■□□□□ 0.92
SPAST-203ENST00000615843 MAP4K1Q92918 833 aa20.83■□□□□ 0.92
SPAST-203ENST00000615843 FAM212AQ96EL1 285 aa20.83■□□□□ 0.92
SPAST-203ENST00000615843 ADCY9O60503 1353 aa20.83■□□□□ 0.92
SPAST-203ENST00000615843 ZMYND10O75800 440 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 ADD1P35611 737 aaKnown RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 UNC5CLQ8IV45 518 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 FBXO18Q8NFZ0 1043 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 EDC4Q6P2E9 1401 aaKnown RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 KDM5DQ9BY66 1539 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 LDHBP07195 334 aaKnown RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 SH3BGRP55822 239 aaPredicted RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 MAP7Q14244 749 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 ZNF790Q6PG37 636 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 CCDC197Q8NCU1 140 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 TTC16Q8NEE8 873 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 ZBTB21Q9ULJ3 1066 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 SSX2IPQ9Y2D8 614 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 PDIA3P30101 505 aaKnown RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 BIRC3Q13489 604 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 U2AF1L4Q8WU68 220 aaKnown RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 JPH2Q9BR39 696 aaPredicted RBP20.82■□□□□ 0.92
SPAST-203ENST00000615843 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 ZMYM6O95789 1325 aa20.82■□□□□ 0.92
SPAST-203ENST00000615843 ZNF532Q9HCE3 1301 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 LRRD1A4D1F6 860 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 TBC1D8O95759 1140 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 VPS37BQ9H9H4 285 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 GTPBP6O43824 516 aaPredicted RBP20.81■□□□□ 0.92
SPAST-203ENST00000615843 CASP8Q14790 479 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 RBBP5Q15291 538 aaKnown RBP20.81■□□□□ 0.92
SPAST-203ENST00000615843 PDLIM2Q96JY6 352 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 YTHDC2Q9H6S0 1430 aaKnown RBP20.81■□□□□ 0.92
SPAST-203ENST00000615843 RBL2Q08999 1139 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 SLC39A14Q15043 492 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 MAIP1Q8WWC4 291 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 CCDC169A6NNP5 214 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 GNA14O95837 355 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 PTPN21Q16825 1174 aa20.81■□□□□ 0.92
SPAST-203ENST00000615843 MAGEA9P43362 315 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 NUF2Q9BZD4 464 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
SPAST-203ENST00000615843 TPX2Q9ULW0 747 aaKnown RBP20.8■□□□□ 0.92
SPAST-203ENST00000615843 RFC1P35251 1148 aaPredicted RBP20.8■□□□□ 0.92
SPAST-203ENST00000615843 IP6K1Q92551 441 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 ITIH3Q06033 890 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 CALCRLQ16602 461 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 GPCPD1Q9NPB8 672 aa20.8■□□□□ 0.92
SPAST-203ENST00000615843 HSPD1P10809 573 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms