RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 SPICE1Q8N0Z3 855 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 PNMA6EA0A0J9YXQ4 647 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 DLATP10515 647 aaKnown RBP20.7■□□□□ 0.9
GABPB1-212ENST00000615671 BCRP11274 1271 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 KLHL30Q0D2K2 578 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 C8orf34Q49A92 452 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 FLOT1O75955 427 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 ATP5DP30049 168 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 SLC12A2P55011 1212 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 CTSWP56202 376 aa20.7■□□□□ 0.9
GABPB1-212ENST00000615671 K7ENM7 598 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 IVLP07476 585 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 KCNQ4P56696 695 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 POLA2Q14181 598 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 CARD14Q9BXL6 1004 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 ZBTB40Q9NUA8 1239 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 MAGED2Q9UNF1 606 aaPredicted RBP20.69■□□□□ 0.9
GABPB1-212ENST00000615671 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
GABPB1-212ENST00000615671 MAP3K1Q13233 1512 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 P4HA1P13674 534 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 FANCCQ00597 558 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 SLC9C1Q4G0N8 1177 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 U2AF1L4Q8WU68 220 aaKnown RBP20.69■□□□□ 0.9
GABPB1-212ENST00000615671 TRIM37O94972 964 aa20.69■□□□□ 0.9
GABPB1-212ENST00000615671 XRCC6P12956 609 aaKnown RBP eCLIP20.69■□□□□ 0.9
GABPB1-212ENST00000615671 REXO1Q8N1G1 1221 aaKnown RBP20.69■□□□□ 0.9
GABPB1-212ENST00000615671 EBAG9O00559 213 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 RRAGAQ7L523 313 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 ARHGEF2Q92974 986 aaKnown RBP20.68■□□□□ 0.9
GABPB1-212ENST00000615671 PPME1Q9Y570 386 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 USP17L12C9JPN9 530 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 USP17L21D6R901 530 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 ACTN4O43707 911 aaKnown RBP20.68■□□□□ 0.9
GABPB1-212ENST00000615671 U2AF2P26368 475 aaKnown RBP eCLIP20.68■□□□□ 0.9
GABPB1-212ENST00000615671 ARPP19P56211 112 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 CERKLQ49MI3 558 aaPredicted RBP20.68■□□□□ 0.9
GABPB1-212ENST00000615671 HHATQ5VTY9 493 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 SLC4A1P02730 911 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 GNPTABQ3T906 1256 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 TRIM50Q86XT4 487 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 RAPGEF6Q8TEU7 1601 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 KRT40Q6A162 431 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 RSAD2Q8WXG1 361 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 POSTNQ15063 836 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 DCLK2Q8N568 766 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 BZW2Q9Y6E2 419 aaKnown RBP20.68■□□□□ 0.9
GABPB1-212ENST00000615671 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
GABPB1-212ENST00000615671 ZNF202O95125 648 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 BTDP43251 543 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 NEDD9Q14511 834 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 SFMBT2Q5VUG0 894 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 CDC37L1Q7L3B6 337 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 ADAT2Q7Z6V5 191 aaKnown RBP20.67■□□□□ 0.9
GABPB1-212ENST00000615671 GPATCH8Q9UKJ3 1502 aaKnown RBP20.67■□□□□ 0.9
GABPB1-212ENST00000615671 KRT15P19012 456 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 DPP9Q86TI2 863 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 AFAP1L2Q8N4X5 818 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 RTEL1Q9NZ71 1219 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 GOLGA6CA6NDK9 693 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 GOLGA6BA6NDN3 693 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 GOLGA6DP0CG33 693 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 SNX21Q969T3 373 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 GOLGA6AQ9NYA3 693 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 ZNF518AQ6AHZ1 1483 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 PPP2R5AQ15172 486 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 CTAGE3PQ8IX95 158 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 SLF1Q9BQI6 1058 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 PSTPIP2Q9H939 334 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 COBLO75128 1261 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 STAM2O75886 525 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 HDXQ7Z353 690 aa20.67■□□□□ 0.9
GABPB1-212ENST00000615671 GTF2A1P52655 376 aaPredicted RBP20.66■□□□□ 0.9
GABPB1-212ENST00000615671 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
GABPB1-212ENST00000615671 KAZNQ674X7 775 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 NXNQ6DKJ4 435 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 NME8Q8N427 588 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 CUTAO60888 179 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 CCDC170Q8IYT3 715 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 GABPB2Q8TAK5 448 aaPredicted RBP20.66■□□□□ 0.9
GABPB1-212ENST00000615671 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
GABPB1-212ENST00000615671 SLAIN2Q9P270 581 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 TRAPPC8Q9Y2L5 1435 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 LRRIQ4A6NIV6 560 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 POLR2MP0CAP2 368 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 MTX1Q13505 466 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 ERCC6LQ2NKX8 1250 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 GLT8D2Q9H1C3 349 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 VPS41P49754 854 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 C17orf53Q8N3J3 647 aaPredicted RBP20.66■□□□□ 0.9
GABPB1-212ENST00000615671 RYBPQ8N488 228 aaPredicted RBP20.66■□□□□ 0.9
GABPB1-212ENST00000615671 CHURC1Q8WUH1 139 aa20.66■□□□□ 0.9
GABPB1-212ENST00000615671 SARNPP82979 210 aaKnown RBP20.65■□□□□ 0.9
GABPB1-212ENST00000615671 UBN2Q6ZU65 1347 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 KCNQ3O43525 872 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 ZBTB8OSQ8IWT0 167 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 ANKRD42Q8N9B4 389 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 GDAP1L1Q96MZ0 367 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 SERTAD1Q9UHV2 236 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 E7EWF7 191 aa20.65■□□□□ 0.9
GABPB1-212ENST00000615671 TNNC2P02585 160 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms