RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 STX8Q9UNK0 236 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 PCDHB6Q9Y5E3 794 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 G3V3G9 751 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 CMA1P23946 247 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 DCAF8Q5TAQ9 597 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 DEFB132Q7Z7B7 95 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 EYA3Q99504 573 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 TMEM47Q9BQJ4 181 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 PYCARDQ9ULZ3 195 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 SUGT1Q9Y2Z0 365 aa21.99■■□□□ 1.11
MMP28-204ENST00000615136 UQCRHLA0A096LP55 91 aa21.98■■□□□ 1.11
MMP28-204ENST00000615136 UQCRHP07919 91 aa21.98■■□□□ 1.11
MMP28-204ENST00000615136 ATP2B1P20020 1258 aa21.98■■□□□ 1.11
MMP28-204ENST00000615136 GRIN1Q05586 938 aa21.98■■□□□ 1.11
MMP28-204ENST00000615136 C17orf53Q8N3J3 647 aaPredicted RBP21.98■■□□□ 1.11
MMP28-204ENST00000615136 WNT7AO00755 349 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 PTGS1P23219 599 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 C7orf43Q8WVR3 580 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.97■■□□□ 1.11
MMP28-204ENST00000615136 MAD2L2Q9UI95 211 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 ZNF646O15015 1829 aaPredicted RBP21.97■■□□□ 1.11
MMP28-204ENST00000615136 GOLGA6L19H0YKK7 550 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 ZNF202O95125 648 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 SLURP2P0DP57 97 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 APOBEC3HQ6NTF7 200 aaKnown RBP21.97■■□□□ 1.11
MMP28-204ENST00000615136 USP40Q9NVE5 1235 aa21.97■■□□□ 1.11
MMP28-204ENST00000615136 GRM4Q14833 912 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 SPECC1Q5M775 1068 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 CDC42EP5Q6NZY7 148 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 HPSEQ9Y251 543 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 SCG2P13521 617 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 KRT2P35908 639 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 RILPL1Q5EBL4 403 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 PODNQ7Z5L7 613 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 NEDD1Q8NHV4 660 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 TNFRSF25Q93038 417 aa21.96■■□□□ 1.11
MMP28-204ENST00000615136 RRP9O43818 475 aaKnown RBP21.95■■□□□ 1.1
MMP28-204ENST00000615136 ECE2O60344 883 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 GOLGA8HP0CJ92 632 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 KIF5BP33176 963 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 NFIAQ12857 509 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 PFKFB3Q16875 520 aaPredicted RBP21.95■■□□□ 1.1
MMP28-204ENST00000615136 CCDC186Q7Z3E2 898 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 KIAA0825Q8IV33 1275 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 DHX40Q8IX18 779 aaKnown RBP21.95■■□□□ 1.1
MMP28-204ENST00000615136 CEP57L1Q8IYX8 460 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 CEP95Q96GE4 821 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 SDF4Q9BRK5 362 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 CPVLQ9H3G5 476 aa21.95■■□□□ 1.1
MMP28-204ENST00000615136 CYTH3O43739 400 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 XBP1P17861 261 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 GABPAQ06546 454 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 AOC3Q16853 763 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 DNTTIP2Q5QJE6 756 aaKnown RBP21.94■■□□□ 1.1
MMP28-204ENST00000615136 RESP18Q5W5W9 173 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 GPKOWQ92917 476 aaPredicted RBP eCLIP21.94■■□□□ 1.1
MMP28-204ENST00000615136 MRFAP1L1Q96HT8 127 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 PRIMPOLQ96LW4 560 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 FBXO2Q9UK22 296 aaPredicted RBP21.94■■□□□ 1.1
MMP28-204ENST00000615136 CRKP46108 304 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 NT5C2P49902 561 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 DACT2Q5SW24 774 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 JMYQ8N9B5 988 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 CNKSR1Q969H4 720 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 TEKT1Q969V4 418 aa21.94■■□□□ 1.1
MMP28-204ENST00000615136 CACNB3P54284 484 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 TYW1BQ6NUM6 668 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 HHIPL2Q6UWX4 724 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 ZFPM1Q8IX07 1006 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 ZNF287Q9HBT7 754 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 KIAA1468Q9P260 1216 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 CLIP2Q9UDT6 1046 aa21.93■■□□□ 1.1
MMP28-204ENST00000615136 DYNC1I1O14576 645 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 CUTAO60888 179 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 CCDC178Q5BJE1 867 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 CLEC10AQ8IUN9 316 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 DRC7Q8IY82 874 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 KRI1Q8N9T8 703 aaKnown RBP21.92■■□□□ 1.1
MMP28-204ENST00000615136 NAT10Q9H0A0 1025 aaKnown RBP21.92■■□□□ 1.1
MMP28-204ENST00000615136 FAM237AA0A1B0GTK4 181 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
MMP28-204ENST00000615136 BECN2A8MW95 431 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 NRBP1Q9UHY1 535 aa21.92■■□□□ 1.1
MMP28-204ENST00000615136 C21orf2O43822 256 aa21.91■■□□□ 1.1
MMP28-204ENST00000615136 AKR1B1P15121 316 aa21.91■■□□□ 1.1
MMP28-204ENST00000615136 PTPREP23469 700 aa21.91■■□□□ 1.1
MMP28-204ENST00000615136 SYKP43405 635 aa21.91■■□□□ 1.1
MMP28-204ENST00000615136 MYRIPQ8NFW9 859 aa21.91■■□□□ 1.1
MMP28-204ENST00000615136 BPIFA3Q9BQP9 254 aa21.91■■□□□ 1.1
MMP28-204ENST00000615136 OSBPL5Q9H0X9 879 aaPredicted RBP21.91■■□□□ 1.1
MMP28-204ENST00000615136 STRIP1Q5VSL9 837 aa21.9■■□□□ 1.1
MMP28-204ENST00000615136 NLRP5P59047 1200 aa21.9■■□□□ 1.1
MMP28-204ENST00000615136 USP17L2Q6R6M4 530 aa21.9■■□□□ 1.1
MMP28-204ENST00000615136 TIGD1Q96MW7 591 aa21.9■■□□□ 1.1
MMP28-204ENST00000615136 NOVP48745 357 aa21.89■■□□□ 1.1
MMP28-204ENST00000615136 USP49Q70CQ1 688 aa21.89■■□□□ 1.1
MMP28-204ENST00000615136 MYH8P13535 1937 aa21.89■■□□□ 1.09
MMP28-204ENST00000615136 YDJCA8MPS7 323 aa21.89■■□□□ 1.09
MMP28-204ENST00000615136 EIF6P56537 245 aaKnown RBP21.89■■□□□ 1.09
MMP28-204ENST00000615136 SF3B2Q13435 895 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms