RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 STRNO43815 780 aa20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 ADCYAP1R1P41586 468 aa20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 SNX17Q15036 470 aa20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 SYMPKQ92797 1274 aaKnown RBP20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 FERMT2Q96AC1 680 aa20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 MOV10L1Q9BXT6 1211 aaKnown RBP20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 TANGO6Q9C0B7 1094 aa20.97■□□□□ 0.95
CSNK1E-215ENST00000612795 IGHA2P01877 340 aa20.96■□□□□ 0.95
CSNK1E-215ENST00000612795 MAGEB6Q8N7X4 407 aa20.96■□□□□ 0.95
CSNK1E-215ENST00000612795 RNPC3Q96LT9 517 aaKnown RBP20.96■□□□□ 0.95
CSNK1E-215ENST00000612795 SPATC1LQ9H0A9 340 aa20.96■□□□□ 0.95
CSNK1E-215ENST00000612795 IPO8O15397 1037 aaKnown RBP20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 TRIM27P14373 513 aa20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 ERCC3P19447 782 aa20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 SHMT1P34896 483 aa20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 COG2Q14746 738 aa20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 SH3RF1Q7Z6J0 888 aa20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 SHCBP1Q8NEM2 672 aa20.95■□□□□ 0.94
CSNK1E-215ENST00000612795 TMEM265A0A087WTH1 108 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 TRIM43BA6NCK2 446 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 MPHOSPH10O00566 681 aaKnown RBP20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 PLS1Q14651 629 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 SEPT2Q15019 361 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 LRRC41Q15345 812 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 FAM47AQ5JRC9 791 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 TRIM43Q96BQ3 446 aaPredicted RBP20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 HOXC10Q9NYD6 342 aa20.94■□□□□ 0.94
CSNK1E-215ENST00000612795 COBLO75128 1261 aa20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 SURF6O75683 361 aaKnown RBP20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 POLR3DP05423 398 aaPredicted RBP20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 PRAMEF19Q5SWL8 479 aa20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 C1orf53Q5VUE5 145 aa20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 NCAPG2Q86XI2 1143 aa20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 FRAT1Q92837 279 aaPredicted RBP20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 TLR7Q9NYK1 1049 aaKnown RBP20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 DBNLQ9UJU6 430 aaKnown RBP20.93■□□□□ 0.94
CSNK1E-215ENST00000612795 CLTBP09497 229 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 GUCY1A2P33402 732 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 PLCD1P51178 756 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 TLE2Q04725 743 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 MAP3K12Q12852 859 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 MB21D1Q8N884 522 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 CLUAP1Q96AJ1 413 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 MROH8Q9H579 483 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 TNNQ9UQP3 1299 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 TACC3Q9Y6A5 838 aa20.92■□□□□ 0.94
CSNK1E-215ENST00000612795 POLA2Q14181 598 aa20.91■□□□□ 0.94
CSNK1E-215ENST00000612795 TTC28Q96AY4 2481 aa20.91■□□□□ 0.94
CSNK1E-215ENST00000612795 MAML3Q96JK9 1138 aa20.91■□□□□ 0.94
CSNK1E-215ENST00000612795 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-215ENST00000612795 XPNPEP3Q9NQH7 507 aa20.91■□□□□ 0.94
CSNK1E-215ENST00000612795 RARBP10826 455 aa20.9■□□□□ 0.94
CSNK1E-215ENST00000612795 RAG1P15918 1043 aa20.9■□□□□ 0.94
CSNK1E-215ENST00000612795 ABRAQ8N0Z2 381 aa20.9■□□□□ 0.94
CSNK1E-215ENST00000612795 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
CSNK1E-215ENST00000612795 PHF24Q9UPV7 400 aa20.9■□□□□ 0.94
CSNK1E-215ENST00000612795 BAZ2AQ9UIF9 1905 aaKnown RBP20.9■□□□□ 0.94
CSNK1E-215ENST00000612795 A0A1W2PRG0 241 aa20.89■□□□□ 0.93
CSNK1E-215ENST00000612795 FLOT1O75955 427 aa20.89■□□□□ 0.93
CSNK1E-215ENST00000612795 FCER1AP12319 257 aa20.89■□□□□ 0.93
CSNK1E-215ENST00000612795 TMED8Q6PL24 325 aaPredicted RBP20.89■□□□□ 0.93
CSNK1E-215ENST00000612795 SAMD1Q6SPF0 538 aaPredicted RBP20.89■□□□□ 0.93
CSNK1E-215ENST00000612795 RNF180Q86T96 592 aa20.89■□□□□ 0.93
CSNK1E-215ENST00000612795 PQBP1O60828 265 aaKnown RBP20.88■□□□□ 0.93
CSNK1E-215ENST00000612795 BCAR3O75815 825 aa20.88■□□□□ 0.93
CSNK1E-215ENST00000612795 ITGB8P26012 769 aa20.88■□□□□ 0.93
CSNK1E-215ENST00000612795 FPGSQ05932 587 aa20.88■□□□□ 0.93
CSNK1E-215ENST00000612795 TJAP1Q5JTD0 557 aa20.88■□□□□ 0.93
CSNK1E-215ENST00000612795 ANTXR1Q9H6X2 564 aa20.88■□□□□ 0.93
CSNK1E-215ENST00000612795 MAGEB6P1A0A0J9YX57 407 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 DNAJB2P25686 324 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 DSG3P32926 999 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 EPHB4P54760 987 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 ATP8B2P98198 1209 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 GABPAQ06546 454 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 TMEM179Q6ZVK1 233 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 ATG4CQ96DT6 458 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 RIOK1Q9BRS2 568 aaKnown RBP20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 CRNKL1Q9BZJ0 848 aaKnown RBP20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 ARHGEF10LQ9HCE6 1279 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 MCM9Q9NXL9 1143 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 NRBP1Q9UHY1 535 aa20.87■□□□□ 0.93
CSNK1E-215ENST00000612795 A0A1W2PQ45 241 aaPredicted RBP20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 A0A1W2PQY0 241 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 KIAA0355O15063 1070 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 PGK1P00558 417 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 GRIN2CQ14957 1233 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 SPICE1Q8N0Z3 855 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 TMEM57Q8N5G2 664 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 EAF2Q96CJ1 260 aaPredicted RBP20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 SH2D4AQ9H788 454 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 C1orf115Q9H7X2 142 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 MYO9BQ13459 2157 aa20.86■□□□□ 0.93
CSNK1E-215ENST00000612795 ROBO3Q96MS0 1386 aa20.85■□□□□ 0.93
CSNK1E-215ENST00000612795 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.85■□□□□ 0.93
CSNK1E-215ENST00000612795 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.85■□□□□ 0.93
CSNK1E-215ENST00000612795 TNFRSF10AO00220 468 aa20.85■□□□□ 0.93
CSNK1E-215ENST00000612795 USP38Q8NB14 1042 aa20.85■□□□□ 0.93
CSNK1E-215ENST00000612795 MMP19Q99542 508 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms