RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 GSG1L2A8MUP6 293 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 TUBB4AP04350 444 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 CYP2D6P10635 497 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 CDC25AP30304 524 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 KRT9P35527 623 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 CALCRLQ16602 461 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 SPECC1LQ69YQ0 1117 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 NCOA3Q9Y6Q9 1424 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 COBLO75128 1261 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 USH1GQ495M9 461 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 STXBP4Q6ZWJ1 553 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 PKD2L1Q9P0L9 805 aa14.78□□□□□ -0.04
TCF3-220ENST00000611869 GOLGA6L10A6NI86 522 aa14.77□□□□□ -0.04
TCF3-220ENST00000611869 ARHGAP6O43182 974 aa14.77□□□□□ -0.04
TCF3-220ENST00000611869 ALDH1B1P30837 517 aa14.77□□□□□ -0.04
TCF3-220ENST00000611869 KIF5AQ12840 1032 aa14.77□□□□□ -0.04
TCF3-220ENST00000611869 EHBP1Q8NDI1 1231 aa14.77□□□□□ -0.04
TCF3-220ENST00000611869 ALDH8A1Q9H2A2 487 aaPredicted RBP14.77□□□□□ -0.04
TCF3-220ENST00000611869 NARFQ9UHQ1 456 aa14.77□□□□□ -0.04
TCF3-220ENST00000611869 TRPC5Q9UL62 973 aaPredicted RBP14.77□□□□□ -0.04
TCF3-220ENST00000611869 TAF3Q5VWG9 929 aa14.77□□□□□ -0.05
TCF3-220ENST00000611869 SRRTQ9BXP5 876 aaKnown RBP14.77□□□□□ -0.05
TCF3-220ENST00000611869 GOLPH3LQ9H4A5 285 aa14.77□□□□□ -0.05
TCF3-220ENST00000611869 KRT86O43790 486 aa14.77□□□□□ -0.05
TCF3-220ENST00000611869 MAP9Q49MG5 647 aa14.77□□□□□ -0.05
TCF3-220ENST00000611869 USP17L3A6NCW0 530 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 USP17L4A6NCW7 530 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 ERLIN2O94905 339 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 TECP42680 631 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
TCF3-220ENST00000611869 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
TCF3-220ENST00000611869 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 USP17L1Q7RTZ2 530 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 ARFGAP3Q9NP61 516 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 KRT83P78385 493 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 CETN1Q12798 172 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 MCM6Q14566 821 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
TCF3-220ENST00000611869 MARCH10Q8NA82 808 aaPredicted RBP14.76□□□□□ -0.05
TCF3-220ENST00000611869 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 JDP2Q8WYK2 163 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 CAPZA3Q96KX2 299 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 LY9Q9HBG7 655 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 CWC15Q9P013 229 aaKnown RBP14.76□□□□□ -0.05
TCF3-220ENST00000611869 TBC1D7Q9P0N9 293 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 CHMP2AO43633 222 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 CNNM4Q6P4Q7 775 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 ZNF34Q8IZ26 560 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 SEPT12Q8IYM1 358 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
TCF3-220ENST00000611869 PLS1Q14651 629 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 CCDC122Q5T0U0 273 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 LARGE2Q8N3Y3 721 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 FAM13AO94988 1023 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 GRAPQ13588 217 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 CCDC65Q8IXS2 484 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 GRAPLQ8TC17 118 aaPredicted RBP14.75□□□□□ -0.05
TCF3-220ENST00000611869 DESI2Q9BSY9 194 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 CARD6Q9BX69 1037 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 NMT2O60551 498 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 GOLGA8FQ08AF8 430 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 GOLGA8DPQ0D2H9 430 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 PRPF4BQ13523 1007 aaKnown RBP14.75□□□□□ -0.05
TCF3-220ENST00000611869 TTLL12Q14166 644 aaPredicted RBP14.75□□□□□ -0.05
TCF3-220ENST00000611869 KRT222Q8N1A0 295 aa14.75□□□□□ -0.05
TCF3-220ENST00000611869 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 MST1RQ04912 1400 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 KIAA1524Q8TCG1 905 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
TCF3-220ENST00000611869 ERO1AQ96HE7 468 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 EVCP57679 992 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 HERC4Q5GLZ8 1057 aaPredicted RBP14.74□□□□□ -0.05
TCF3-220ENST00000611869 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 TIGD1Q96MW7 591 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 MACROD2A1Z1Q3 448 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 TACC1O75410 805 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 RHOXF2BP0C7M4 288 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 CHMP4BP1P59074 171 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 ELF2Q15723 593 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 GOLGA1Q92805 767 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 FAM84BQ96KN1 310 aaPredicted RBP14.74□□□□□ -0.05
TCF3-220ENST00000611869 RHOXF2Q9BQY4 288 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 PPIP5K2O43314 1243 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 ATP1A3P13637 1013 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 PDE6BP35913 854 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 TERF1P54274 439 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 ITPK1Q13572 414 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 HLTFQ14527 1009 aaKnown RBP eCLIP14.74□□□□□ -0.05
TCF3-220ENST00000611869 NCAPH2Q6IBW4 605 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 USP17L2Q6R6M4 530 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 NEK8Q86SG6 692 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 PDLIM2Q96JY6 352 aa14.74□□□□□ -0.05
TCF3-220ENST00000611869 IGSF3O75054 1194 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 BBOX1O75936 387 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 DCAF17Q5H9S7 520 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms