RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SAMSN1Q9NSI8 373 aaKnown RBP19.63■□□□□ 0.73
NEK3-206ENST00000611833 OGFRQ9NZT2 677 aa19.63■□□□□ 0.73
NEK3-206ENST00000611833 MAST2Q6P0Q8 1798 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 CCDC88AQ3V6T2 1871 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 TBX2Q13207 712 aaPredicted RBP19.62■□□□□ 0.73
NEK3-206ENST00000611833 TTC38Q5R3I4 469 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 BAG1Q99933 345 aaPredicted RBP19.62■□□□□ 0.73
NEK3-206ENST00000611833 IRS2Q9Y4H2 1338 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 NPHP1O15259 732 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 PAGE5Q96GU1 130 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 NGLY1Q96IV0 654 aa19.62■□□□□ 0.73
NEK3-206ENST00000611833 ARPP21Q9UBL0 812 aaPredicted RBP19.62■□□□□ 0.73
NEK3-206ENST00000611833 SBK1Q52WX2 424 aa19.61■□□□□ 0.73
NEK3-206ENST00000611833 SLC51AQ86UW1 340 aa19.61■□□□□ 0.73
NEK3-206ENST00000611833 PHLPP2Q6ZVD8 1323 aa19.61■□□□□ 0.73
NEK3-206ENST00000611833 VWA3AA6NCI4 1184 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 NLRP5P59047 1200 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 CCDC93Q567U6 631 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 KLHL10Q6JEL2 608 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 TMEM139Q8IV31 216 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 REXO1L1PQ8IX06 675 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
NEK3-206ENST00000611833 MED15Q96RN5 788 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 RTCBQ9Y3I0 505 aaKnown RBP19.6■□□□□ 0.73
NEK3-206ENST00000611833 TNRC6CQ9HCJ0 1690 aaKnown RBP19.6■□□□□ 0.73
NEK3-206ENST00000611833 ADKP55263 362 aaKnown RBP19.6■□□□□ 0.73
NEK3-206ENST00000611833 SLC4A8Q2Y0W8 1093 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 KMT5BQ4FZB7 885 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 CCNL1Q9UK58 526 aaPredicted RBP19.6■□□□□ 0.73
NEK3-206ENST00000611833 PPP2R2CQ9Y2T4 447 aa19.6■□□□□ 0.73
NEK3-206ENST00000611833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.6■□□□□ 0.73
NEK3-206ENST00000611833 TSPY2A6NKD2 308 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 CASP1P29466 404 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 PTGDRQ13258 359 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 CT47A1Q5JQC4 288 aaPredicted RBP19.59■□□□□ 0.73
NEK3-206ENST00000611833 FAM182BQ5T319 152 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 RCSD1Q6JBY9 416 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 BAZ2BQ9UIF8 2168 aaKnown RBP19.59■□□□□ 0.73
NEK3-206ENST00000611833 STX10O60499 249 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 USP17L8P0C7I0 530 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 SCG2P13521 617 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 VEGFAP15692 232 aaPredicted RBP19.59■□□□□ 0.73
NEK3-206ENST00000611833 TRIM65Q6PJ69 517 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 SH3RF1Q7Z6J0 888 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 DZIP1Q86YF9 867 aaKnown RBP19.59■□□□□ 0.73
NEK3-206ENST00000611833 TC2NQ8N9U0 490 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 MCM9Q9NXL9 1143 aa19.59■□□□□ 0.73
NEK3-206ENST00000611833 DDX41Q9UJV9 622 aaKnown RBP19.59■□□□□ 0.73
NEK3-206ENST00000611833 STX17P56962 302 aa19.58■□□□□ 0.73
NEK3-206ENST00000611833 NR1I3Q14994 352 aa19.58■□□□□ 0.73
NEK3-206ENST00000611833 SPATA1Q5VX52 437 aa19.58■□□□□ 0.73
NEK3-206ENST00000611833 PIK3AP1Q6ZUJ8 805 aa19.58■□□□□ 0.73
NEK3-206ENST00000611833 GSDMAQ96QA5 445 aa19.58■□□□□ 0.73
NEK3-206ENST00000611833 ATP2C1P98194 919 aaPredicted RBP19.58■□□□□ 0.72
NEK3-206ENST00000611833 ERCC6LQ2NKX8 1250 aa19.58■□□□□ 0.72
NEK3-206ENST00000611833 FBXO38Q6PIJ6 1188 aa19.58■□□□□ 0.72
NEK3-206ENST00000611833 FAM177A1Q8N128 213 aaPredicted RBP19.58■□□□□ 0.72
NEK3-206ENST00000611833 SYNRGQ9UMZ2 1314 aa19.58■□□□□ 0.72
NEK3-206ENST00000611833 ADAMTS3O15072 1205 aa19.57■□□□□ 0.72
NEK3-206ENST00000611833 ZSCAN20P17040 1043 aaPredicted RBP19.57■□□□□ 0.72
NEK3-206ENST00000611833 DPYDQ12882 1025 aa19.57■□□□□ 0.72
NEK3-206ENST00000611833 MKRN1Q9UHC7 482 aaKnown RBP19.57■□□□□ 0.72
NEK3-206ENST00000611833 SBF2Q86WG5 1849 aa19.57■□□□□ 0.72
NEK3-206ENST00000611833 A0A1B0GTH6 734 aa19.57■□□□□ 0.72
NEK3-206ENST00000611833 GOLGA6L9A6NEM1 432 aa19.57■□□□□ 0.72
NEK3-206ENST00000611833 URI1O94763 535 aaPredicted RBP19.57■□□□□ 0.72
NEK3-206ENST00000611833 CD44P16070 742 aaKnown RBP19.57■□□□□ 0.72
NEK3-206ENST00000611833 KIF5BP33176 963 aa19.57■□□□□ 0.72
NEK3-206ENST00000611833 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
NEK3-206ENST00000611833 MCM7P33993 719 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 SPTY2D1Q68D10 685 aaPredicted RBP19.56■□□□□ 0.72
NEK3-206ENST00000611833 TMED8Q6PL24 325 aaPredicted RBP19.56■□□□□ 0.72
NEK3-206ENST00000611833 IQUBQ8NA54 791 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 LRRN4CLQ8ND94 238 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 NHSQ6T4R5 1651 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 TOM1O60784 492 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 TRAPPC10P48553 1259 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 CUL4BQ13620 913 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 SMYD4Q8IYR2 804 aaPredicted RBP19.56■□□□□ 0.72
NEK3-206ENST00000611833 STAMQ92783 540 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 KAT14Q9H8E8 782 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 ANKIB1Q9P2G1 1089 aa19.56■□□□□ 0.72
NEK3-206ENST00000611833 ZBTB22O15209 634 aa19.55■□□□□ 0.72
NEK3-206ENST00000611833 C12orf60Q5U649 245 aa19.55■□□□□ 0.72
NEK3-206ENST00000611833 TOGARAM2Q6ZUX3 1019 aa19.55■□□□□ 0.72
NEK3-206ENST00000611833 MNS1Q8NEH6 495 aa19.55■□□□□ 0.72
NEK3-206ENST00000611833 IL17RBQ9NRM6 502 aa19.55■□□□□ 0.72
NEK3-206ENST00000611833 TAF1LQ8IZX4 1826 aa19.55■□□□□ 0.72
NEK3-206ENST00000611833 AKR1B15C9JRZ8 316 aaPredicted RBP19.54■□□□□ 0.72
NEK3-206ENST00000611833 TFAP4Q01664 338 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 DMTNQ08495 405 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 NFIXQ14938 502 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 PPFIBP1Q86W92 1011 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 DYNLL2Q96FJ2 89 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 SRRTQ9BXP5 876 aaKnown RBP19.54■□□□□ 0.72
NEK3-206ENST00000611833 TEX33O43247 280 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 LDHBP07195 334 aaKnown RBP19.54■□□□□ 0.72
NEK3-206ENST00000611833 GRIK5Q16478 980 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 FILIP1LQ4L180 1135 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 SH3RF3Q8TEJ3 882 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms