RNA–Protein interactions for RNA: ENST00000609796.1

SIRPB2-208, Transcript of signal regulatory protein beta 2, human

TSL 3

Gene SIRPB2, Length 1,111 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIRPB2-208	ENST00000609796	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.75	□□□□□ -0.21
SIRPB2-208	ENST00000609796	RBPJL	Q9UBG7	517 aa		13.75	□□□□□ -0.21
SIRPB2-208	ENST00000609796	MYH7	P12883	1935 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	CATSPERG	Q6ZRH7	1159 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	CCDC129	Q6ZRS4	1044 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	IFNL3	Q8IZI9	196 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	GPRC5A	Q8NFJ5	357 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	PXYLP1	Q8TE99	480 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	PAGR1	Q9BTK6	254 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	HTATIP2	Q9BUP3	242 aa		13.74	□□□□□ -0.21
SIRPB2-208	ENST00000609796	FARP2	O94887	1054 aa	Predicted RBP	13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	INHA	P05111	366 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	RASA1	P20936	1047 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	IRF5	Q13568	498 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796		Q3C1V9	767 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	KIAA1755	Q5JYT7	1200 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	PLEKHM2	Q8IWE5	1019 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	ARHGEF10L	Q9HCE6	1279 aa		13.73	□□□□□ -0.21
SIRPB2-208	ENST00000609796	ROBO3	Q96MS0	1386 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	TRIM6-TRIM34	B2RNG4	842 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	FOXP2	O15409	715 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	CNMD	O75829	334 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	TFRC	P02786	760 aa	Known RBP	13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	EEF2	P13639	858 aa	Known RBP	13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	ERVK-9	P63128	1117 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	ERVK-24	P63145	666 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	ATP2B2	Q01814	1243 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	SPICE1	Q8N0Z3	855 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	DEFB118	Q96PH6	123 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	NACAP1	Q9BZK3	213 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	NAPB	Q9H115	298 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	KANSL2	Q9H9L4	492 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	MKNK2	Q9HBH9	465 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	PAK6	Q9NQU5	681 aa	Predicted RBP	13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	TMX2	Q9Y320	296 aa		13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.72	□□□□□ -0.21
SIRPB2-208	ENST00000609796	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	PRDM1	O75626	825 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	LPAR1	Q92633	364 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	RILPL2	Q969X0	211 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	FAM227B	Q96M60	508 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	TANGO6	Q9C0B7	1094 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	CRISPLD2	Q9H0B8	497 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	PORCN	Q9H237	461 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	SH2D4A	Q9H788	454 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	VCPKMT	Q9H867	229 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	HELLS	Q9NRZ9	838 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	GJD2	Q9UKL4	321 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	RABGAP1	Q9Y3P9	1069 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796	NR2E3	Q9Y5X4	410 aa		13.71	□□□□□ -0.21
SIRPB2-208	ENST00000609796		A0A0D9SFI3	127 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	MAPK4	P31152	587 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	PPARA	Q07869	468 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	COG2	Q14746	738 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	VPS53	Q5VIR6	699 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	LBX2	Q6XYB7	198 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	CCAR1	Q8IX12	1150 aa	Known RBP	13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	OSBPL3	Q9H4L5	887 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	BTBD7	Q9P203	1132 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	LAMA3	Q16787	3333 aa		13.7	□□□□□ -0.22
SIRPB2-208	ENST00000609796	ALPK3	Q96L96	1907 aa		13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	TRIM32	Q13049	653 aa		13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	NMI	Q13287	307 aa	Predicted RBP	13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	MCMDC2	Q4G0Z9	681 aa		13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	GPR142	Q7Z601	462 aa		13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	DIS3L	Q8TF46	1054 aa	Known RBP	13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	PAWR	Q96IZ0	340 aa	Known RBP	13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	ZNF287	Q9HBT7	754 aa		13.69	□□□□□ -0.22
SIRPB2-208	ENST00000609796	COL6A3	P12111	3177 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	IGKV6D-41	A0A0C4DH26	115 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	SOX1	O00570	391 aa	Predicted RBP	13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	WDR46	O15213	610 aa	Known RBP	13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	RAD21	O60216	631 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	EVI5	O60447	810 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	FLOT1	O75955	427 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	SLC3A2	P08195	630 aa	Known RBP	13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	CYP2B6	P20813	491 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	CCNA1	P78396	465 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	PDE4B	Q07343	736 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	PLEKHH3	Q7Z736	793 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	TICAM2	Q86XR7	235 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	NUDT12	Q9BQG2	462 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	GOPC	Q9HD26	462 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	HOXC10	Q9NYD6	342 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796	NYAP2	Q9P242	653 aa		13.68	□□□□□ -0.22
SIRPB2-208	ENST00000609796		A0A0C4DFX4	3053 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	PLXNB2	O15031	1838 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	CAPN2	P17655	700 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	SDS	P20132	328 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	PDE4A	P27815	886 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	DSG3	P32926	999 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	MNX1	P50219	401 aa	Predicted RBP	13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	CTDSPL2	Q05D32	466 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	FAM47A	Q5JRC9	791 aa		13.67	□□□□□ -0.22
SIRPB2-208	ENST00000609796	MORN1	Q5T089	497 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms