RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CTCFL-222ENST00000609232 TTF2Q9UNY4 1162 aaKnown RBP11.26□□□□□ -0.61
CTCFL-222ENST00000609232 GRIN1Q05586 938 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 PNOCQ13519 176 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 NDUFA8P51970 172 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
CTCFL-222ENST00000609232 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 EYA3Q99504 573 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 AGXT2Q9BYV1 514 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 ATP8A2Q9NTI2 1148 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
CTCFL-222ENST00000609232 GDF11O95390 407 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 USH1GQ495M9 461 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 CNNM3Q8NE01 707 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 PSMD1Q99460 953 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 CFAP45Q9UL16 551 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 C4AP0C0L4 1744 aa11.25□□□□□ -0.61
CTCFL-222ENST00000609232 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 KIF20AO95235 890 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-222ENST00000609232 GRM1Q13255 1194 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 TBC1D22AQ8WUA7 517 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
CTCFL-222ENST00000609232 SPTLC2O15270 562 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-222ENST00000609232 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 KAT14Q9H8E8 782 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 LY9Q9HBG7 655 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
CTCFL-222ENST00000609232 POLR2DO15514 142 aaKnown RBP11.24□□□□□ -0.61
CTCFL-222ENST00000609232 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 SMARCC2Q8TAQ2 1214 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 SCAND2PQ9GZW5 306 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-222ENST00000609232 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
CTCFL-222ENST00000609232 IDEP14735 1019 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 PLCD1P51178 756 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 KCTD19Q17RG1 926 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-222ENST00000609232 SKIDA1Q1XH10 827 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 LETM2Q2VYF4 491 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 LONRF3Q496Y0 759 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 ZNF654Q8IZM8 581 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-222ENST00000609232 PRDM16Q9HAZ2 1276 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 ARPP21Q9UBL0 812 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-222ENST00000609232 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 ZSCAN16Q9H4T2 348 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-222ENST00000609232 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-222ENST00000609232 LAMB2P55268 1798 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 MYH7P12883 1935 aa11.23□□□□□ -0.61
CTCFL-222ENST00000609232 KCTD1Q719H9 257 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 ZSCAN10Q96SZ4 725 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-222ENST00000609232 NUP88Q99567 741 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-222ENST00000609232 CLIP2Q9UDT6 1046 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 MROH7-TTC4A0A0A0MT08 1334 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 PDS5AQ29RF7 1337 aaKnown RBP11.22□□□□□ -0.61
CTCFL-222ENST00000609232 WDR19Q8NEZ3 1342 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 LIFRP42702 1097 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 SYKP43405 635 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 C11orf57Q6ZUT1 292 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-222ENST00000609232 MAEAQ7L5Y9 396 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 TBC1D7Q9P0N9 293 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 FDPSP14324 419 aaKnown RBP11.22□□□□□ -0.61
CTCFL-222ENST00000609232 IL1R1P14778 569 aa11.22□□□□□ -0.61
CTCFL-222ENST00000609232 KLRG2A4D1S0 409 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-222ENST00000609232 PLCG2P16885 1265 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 SH2D3AQ9BRG2 576 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 ZBTB21Q9ULJ3 1066 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 PP2D1A8MPX8 630 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 U2AF2P26368 475 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTCFL-222ENST00000609232 TNNI2P48788 182 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 TMC6Q7Z403 805 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 COA7Q96BR5 231 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 EPSTI1Q96J88 318 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 CBX8Q9HC52 389 aa11.21□□□□□ -0.61
CTCFL-222ENST00000609232 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-222ENST00000609232 PPIP5K2O43314 1243 aa11.21□□□□□ -0.62
CTCFL-222ENST00000609232 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-222ENST00000609232 COL24A1Q17RW2 1714 aa11.21□□□□□ -0.62
CTCFL-222ENST00000609232 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.62
CTCFL-222ENST00000609232 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 586.1 ms