RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ECE1P42892 770 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 RTN1Q16799 776 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 MOB2Q70IA6 237 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 KLRG1Q96E93 195 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 ZNF341Q9BYN7 854 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 PTPDC1A2A3K4 754 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 RCAN1P53805 252 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 ICA1Q05084 483 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 GRM4Q14833 912 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 PHKBQ93100 1093 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 CABP5Q9NP86 173 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 ZDHHC9Q9Y397 364 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-221ENST00000608903 BAZ2BQ9UIF8 2168 aaKnown RBP13.48□□□□□ -0.25
CTCFL-221ENST00000608903 PAPPA2Q9BXP8 1791 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 CTNND1O60716 968 aaKnown RBP13.48□□□□□ -0.25
CTCFL-221ENST00000608903 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 DCAF15Q66K64 600 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
CTCFL-221ENST00000608903 LLPHQ9BRT6 129 aaKnown RBP13.48□□□□□ -0.25
CTCFL-221ENST00000608903 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
CTCFL-221ENST00000608903 PALM3A6NDB9 673 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-221ENST00000608903 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
CTCFL-221ENST00000608903 PDHBP11177 359 aa13.47□□□□□ -0.25
CTCFL-221ENST00000608903 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-221ENST00000608903 CDC37L1Q7L3B6 337 aa13.47□□□□□ -0.25
CTCFL-221ENST00000608903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTCFL-221ENST00000608903 WRNIP1Q96S55 665 aa13.47□□□□□ -0.25
CTCFL-221ENST00000608903 DOCK1Q14185 1865 aa13.46□□□□□ -0.25
CTCFL-221ENST00000608903 TMTC3Q6ZXV5 915 aa13.46□□□□□ -0.25
CTCFL-221ENST00000608903 AIFM3Q96NN9 605 aa13.46□□□□□ -0.25
CTCFL-221ENST00000608903 OTOFQ9HC10 1997 aa13.46□□□□□ -0.25
CTCFL-221ENST00000608903 CWC22Q9HCG8 908 aaKnown RBP13.46□□□□□ -0.25
CTCFL-221ENST00000608903 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
CTCFL-221ENST00000608903 PHIPQ8WWQ0 1821 aa13.46□□□□□ -0.25
CTCFL-221ENST00000608903 FRMPD2Q68DX3 1309 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-221ENST00000608903 CYTH3O43739 400 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 CALM1P0DP23 149 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 CALM2P0DP24 149 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 CALM3P0DP25 149 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 IFNAR1P17181 557 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 SHISA4Q96DD7 197 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 MAP3K14Q99558 947 aa13.46□□□□□ -0.26
CTCFL-221ENST00000608903 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 ASNSP08243 561 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 SYT1P21579 422 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 DGKZQ13574 1117 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 SCYL3Q8IZE3 742 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 NUP88Q99567 741 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-221ENST00000608903 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
CTCFL-221ENST00000608903 TMX2Q9Y320 296 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 CNTNAP5Q8WYK1 1306 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 F5H6K3 240 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 CPLX1O14810 134 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 NDUFB10O96000 172 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 PTPRAP18433 802 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 KLRC3Q07444 240 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 CTCFLQ8NI51 663 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-221ENST00000608903 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 ORC3Q9UBD5 711 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-221ENST00000608903 SNCAIPQ9Y6H5 919 aa13.45□□□□□ -0.26
CTCFL-221ENST00000608903 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
CTCFL-221ENST00000608903 FMNL1O95466 1100 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-221ENST00000608903 FOSBP53539 338 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 PKN1Q16512 942 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 NOL9Q5SY16 702 aaKnown RBP13.44□□□□□ -0.26
CTCFL-221ENST00000608903 SLFN13Q68D06 897 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 KCTD1Q719H9 257 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 CLMNQ96JQ2 1002 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 GPCPD1Q9NPB8 672 aa13.44□□□□□ -0.26
CTCFL-221ENST00000608903 RBM28Q9NW13 759 aaKnown RBP13.44□□□□□ -0.26
CTCFL-221ENST00000608903 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 MCM4P33991 863 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 MAP3K9P80192 1104 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 VGLL4Q14135 290 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 GMCL1P1Q8NEA9 526 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 CCDC196A0A1B0GTZ2 297 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms