RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 C21orf2O43822 256 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 CALM1P0DP23 149 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 CALM2P0DP24 149 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 CALM3P0DP25 149 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ZNF18P17022 549 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 BMP6P22004 513 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ISM2Q6H9L7 571 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 SMARCE1Q969G3 411 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 CNKSR1Q969H4 720 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 CCDC34Q96HJ3 373 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 FANCLQ9NW38 375 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 PCDHB6Q9Y5E3 794 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 DDAH1O94760 285 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ERCC5P28715 1186 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 PDE4BQ07343 736 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 FUT2Q10981 343 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ADGRA1Q86SQ6 560 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ANKRD18AQ8IVF6 992 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ARID3AQ99856 593 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 BSDC1Q9NW68 430 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-214ENST00000604828 SERTAD1Q9UHV2 236 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
FOCAD-214ENST00000604828 GOLGA6L9A6NEM1 432 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 POLR2DO15514 142 aaKnown RBP11.67□□□□□ -0.54
FOCAD-214ENST00000604828 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 ZSCAN12O43309 604 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 KRT2P35908 639 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 PLCD1P51178 756 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 ETF1P62495 437 aaKnown RBP11.67□□□□□ -0.54
FOCAD-214ENST00000604828 AKAP17AQ02040 695 aaKnown RBP11.67□□□□□ -0.54
FOCAD-214ENST00000604828 NR5A1Q13285 461 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 ENAHQ8N8S7 591 aaPredicted RBP11.67□□□□□ -0.54
FOCAD-214ENST00000604828 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 FERMT2Q96AC1 680 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 INTS13Q9NVM9 706 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 RAI14Q9P0K7 980 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
FOCAD-214ENST00000604828 MYH6P13533 1939 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 FOXN1O15353 648 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 NT5C2P49902 561 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 CBX1P83916 185 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 GRIN1Q05586 938 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 DMTNQ08495 405 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 PKN1Q16512 942 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 TMEM139Q8IV31 216 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 NUP133Q8WUM0 1156 aa11.67□□□□□ -0.54
FOCAD-214ENST00000604828 GTPBP4Q9BZE4 634 aaKnown RBP11.67□□□□□ -0.54
FOCAD-214ENST00000604828 MINDY4BA8MYZ0 360 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 ORC4O43929 436 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 ZSCAN20P17040 1043 aaPredicted RBP11.66□□□□□ -0.54
FOCAD-214ENST00000604828 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 NAA30Q147X3 362 aaPredicted RBP11.66□□□□□ -0.54
FOCAD-214ENST00000604828 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 SYT10Q6XYQ8 523 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 SH3RF1Q7Z6J0 888 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 OXER1Q8TDS5 423 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 SRRTQ9BXP5 876 aaKnown RBP11.66□□□□□ -0.54
FOCAD-214ENST00000604828 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 BRMS1Q9HCU9 246 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
FOCAD-214ENST00000604828 NFE2L3Q9Y4A8 694 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 TAF1P21675 1872 aa11.66□□□□□ -0.54
FOCAD-214ENST00000604828 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 NFKBIEO00221 500 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 IGSF3O75054 1194 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.54
FOCAD-214ENST00000604828 SPECC1Q5M775 1068 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 IFIT1BQ5T764 474 aaKnown RBP11.65□□□□□ -0.54
FOCAD-214ENST00000604828 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 IQCA1Q86XH1 822 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 REXO1L1PQ8IX06 675 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 TNFRSF25Q93038 417 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 SHISA4Q96DD7 197 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
FOCAD-214ENST00000604828 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
FOCAD-214ENST00000604828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.65□□□□□ -0.54
FOCAD-214ENST00000604828 STX10O60499 249 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 SLFN14P0C7P3 912 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 GYG1P46976 350 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 PRELPP51888 382 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 RASSF7Q02833 373 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 TROAPQ12815 778 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 TRIM65Q6PJ69 517 aa11.65□□□□□ -0.55
FOCAD-214ENST00000604828 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms