RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 AKAP17AQ02040 695 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 N4BP2L2Q92802 583 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 FOXP2O15409 715 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 NMT2O60551 498 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 ZNF772Q68DY9 489 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 EPB41L4AQ9HCS5 686 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 PLCH1Q4KWH8 1693 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 MECOMQ03112 1051 aa17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 SF3B2Q13435 895 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-206ENST00000602655 KIAA0754O94854 1291 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 TRIM65Q6PJ69 517 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 KAT2BQ92831 832 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 PPP2R2CQ9Y2T4 447 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 NEDD4P46934 1319 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 A0A1B0GVL5 298 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 SGSM3Q96HU1 749 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 FAM169AQ9Y6X4 670 aa17.36■□□□□ 0.37
PPFIA3-206ENST00000602655 GLI3P10071 1580 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 CACNB3P54284 484 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 MAP2K1Q02750 393 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 DPCR1Q3MIW9 517 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 NAIF1Q69YI7 327 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 IRX2Q9BZI1 471 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 FANCCQ00597 558 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 CASP8Q14790 479 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 TGFBRAP1Q8WUH2 860 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 DYNLL2Q96FJ2 89 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 CALR3Q96L12 384 aaKnown RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 RNF40O75150 1001 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 ABCC6O95255 1503 aa17.35■□□□□ 0.37
PPFIA3-206ENST00000602655 USP17L8P0C7I0 530 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 ATP1A3P13637 1013 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 VEZTQ9HBM0 779 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 ZSWIM5Q9P217 1185 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 CTCFLQ8NI51 663 aaPredicted RBP17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 SHANK3Q9BYB0 1731 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 GSG1L2A8MUP6 293 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 UBE4AQ14139 1066 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 RBM43Q6ZSC3 357 aaKnown RBP17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
PPFIA3-206ENST00000602655 PPP1R12AO14974 1030 aaPredicted RBP17.33■□□□□ 0.37
PPFIA3-206ENST00000602655 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.37
PPFIA3-206ENST00000602655 FAM71BQ8TC56 605 aa17.33■□□□□ 0.37
PPFIA3-206ENST00000602655 GGA1Q9UJY5 639 aa17.33■□□□□ 0.37
PPFIA3-206ENST00000602655 LDHBP07195 334 aaKnown RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 ARID4AP29374 1257 aaPredicted RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 GRAPQ13588 217 aa17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 RNF187Q5TA31 235 aaPredicted RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 BCAS4Q8TDM0 211 aa17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 SSBP05455 408 aaKnown RBP eCLIP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 SLC26A6Q9BXS9 759 aa17.33■□□□□ 0.36
PPFIA3-206ENST00000602655 ERICH2A1L162 156 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 PAX7P23759 505 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 TM4SF1P30408 202 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 KIAA0825Q8IV33 1275 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 TM6SF1Q9BZW5 370 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 TCP10Q12799 353 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 BEND6Q5SZJ8 279 aaPredicted RBP17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 OTUD6BQ8N6M0 293 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 CD248Q9HCU0 757 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 STX8Q9UNK0 236 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
PPFIA3-206ENST00000602655 FANCGO15287 622 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 ANTXR2P58335 489 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 NEDD9Q14511 834 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 KIRREL3Q8IZU9 778 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 CLIC6Q96NY7 704 aa17.31■□□□□ 0.36
PPFIA3-206ENST00000602655 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms