RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 COL11A1P12107 1806 aaPredicted RBP21.89■■□□□ 1.09
GTPBP3-228ENST00000602165 SPDYE16A6NNV3 312 aaPredicted RBP21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 IGHDP01880 384 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 MAPK4P31152 587 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 ATP2B2Q01814 1243 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 CCAR1Q8IX12 1150 aaKnown RBP21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 SMC5Q8IY18 1101 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 SPICE1Q8N0Z3 855 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 TANGO6Q9C0B7 1094 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 TMX2Q9Y320 296 aa21.88■■□□□ 1.09
GTPBP3-228ENST00000602165 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
GTPBP3-228ENST00000602165 GJB1P08034 283 aa21.87■■□□□ 1.09
GTPBP3-228ENST00000602165 EEF2P13639 858 aaKnown RBP21.87■■□□□ 1.09
GTPBP3-228ENST00000602165 IFNL3Q8IZI9 196 aa21.87■■□□□ 1.09
GTPBP3-228ENST00000602165 SH2D4AQ9H788 454 aa21.87■■□□□ 1.09
GTPBP3-228ENST00000602165 BTBD7Q9P203 1132 aa21.87■■□□□ 1.09
GTPBP3-228ENST00000602165 CYP2B6P20813 491 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 RASA1P20936 1047 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 LBX2Q6XYB7 198 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 CCDC129Q6ZRS4 1044 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 GPR142Q7Z601 462 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 EVI5LQ96CN4 794 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 NUDT12Q9BQG2 462 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 VCPKMTQ9H867 229 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 KANSL2Q9H9L4 492 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 MKNK2Q9HBH9 465 aa21.86■■□□□ 1.09
GTPBP3-228ENST00000602165 HMGCRP04035 888 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 GJA8P48165 433 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 COG2Q14746 738 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 PRPF38BQ5VTL8 546 aaKnown RBP21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 PLEKHH3Q7Z736 793 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 NKX2-3Q8TAU0 364 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 SOCS4Q8WXH5 440 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 LPAR1Q92633 364 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 NACAP1Q9BZK3 213 aa21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 CWC22Q9HCG8 908 aaKnown RBP21.85■■□□□ 1.09
GTPBP3-228ENST00000602165 CCNA1P78396 465 aa21.84■■□□□ 1.09
GTPBP3-228ENST00000602165 TRIM32Q13049 653 aa21.84■■□□□ 1.09
GTPBP3-228ENST00000602165 WDR78Q5VTH9 848 aa21.84■■□□□ 1.09
GTPBP3-228ENST00000602165 U2AF1L4Q8WU68 220 aaKnown RBP21.84■■□□□ 1.09
GTPBP3-228ENST00000602165 TRIB2Q92519 343 aa21.84■■□□□ 1.09
GTPBP3-228ENST00000602165 NAPBQ9H115 298 aa21.84■■□□□ 1.09
GTPBP3-228ENST00000602165 PRDM1O75626 825 aa21.83■■□□□ 1.09
GTPBP3-228ENST00000602165 SAMD1Q6SPF0 538 aaPredicted RBP21.83■■□□□ 1.09
GTPBP3-228ENST00000602165 CHD1LQ86WJ1 897 aa21.83■■□□□ 1.09
GTPBP3-228ENST00000602165 HOXC10Q9NYD6 342 aa21.83■■□□□ 1.09
GTPBP3-228ENST00000602165 WDR46O15213 610 aaKnown RBP21.82■■□□□ 1.08
GTPBP3-228ENST00000602165 RAD21O60216 631 aa21.82■■□□□ 1.08
GTPBP3-228ENST00000602165 FLOT1O75955 427 aa21.82■■□□□ 1.08
GTPBP3-228ENST00000602165 MORN1Q5T089 497 aa21.82■■□□□ 1.08
GTPBP3-228ENST00000602165 USP6NLQ92738 828 aa21.82■■□□□ 1.08
GTPBP3-228ENST00000602165 DEFB118Q96PH6 123 aa21.82■■□□□ 1.08
GTPBP3-228ENST00000602165 FOXP2O15409 715 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 SGPL1O95470 568 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 DSG3P32926 999 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 RGS2P41220 211 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 NUCB1Q02818 461 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 ATG4CQ96DT6 458 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 GOPCQ9HD26 462 aa21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 PAK6Q9NQU5 681 aaPredicted RBP21.81■■□□□ 1.08
GTPBP3-228ENST00000602165 ZNFX1Q9P2E3 1918 aaKnown RBP21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 XRCC5P13010 732 aaKnown RBP21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 IRX6P78412 446 aaPredicted RBP21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 PPARAQ07869 468 aa21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 CCL14Q16627 93 aa21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 ZNF444Q8N0Y2 327 aaPredicted RBP21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 FAM227BQ96M60 508 aa21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 ZNF287Q9HBT7 754 aa21.8■■□□□ 1.08
GTPBP3-228ENST00000602165 ZNF236Q9UL36 1845 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 A0A0D9SFI3 127 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 ZKSCAN1P17029 563 aaPredicted RBP21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 MAP2K5Q13163 448 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 VPS53Q5VIR6 699 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 PLEKHM2Q8IWE5 1019 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 RILPL2Q969X0 211 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 APBA2Q99767 749 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 MOV10L1Q9BXT6 1211 aaKnown RBP21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 SPATC1LQ9H0A9 340 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 HELLSQ9NRZ9 838 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 FBXO28Q9NVF7 368 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 IVNS1ABPQ9Y6Y0 642 aa21.79■■□□□ 1.08
GTPBP3-228ENST00000602165 IGKV6D-41A0A0C4DH26 115 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 TFRCP02786 760 aaKnown RBP21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 PTPREP23469 700 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 PDE4BQ07343 736 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 PLS1Q14651 629 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 FAM83BQ5T0W9 1011 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 MB21D1Q8N884 522 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 HMX1Q9NP08 348 aaPredicted RBP21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 NYAP2Q9P242 653 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 FRMPD3Q5JV73 1810 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 RPTORQ8N122 1335 aa21.78■■□□□ 1.08
GTPBP3-228ENST00000602165 SLC15A5A6NIM6 579 aa21.77■■□□□ 1.08
GTPBP3-228ENST00000602165 FARP2O94887 1054 aaPredicted RBP21.77■■□□□ 1.08
GTPBP3-228ENST00000602165 SLC3A2P08195 630 aaKnown RBP21.77■■□□□ 1.08
GTPBP3-228ENST00000602165 PRKAR2AP13861 404 aaKnown RBP21.77■■□□□ 1.08
GTPBP3-228ENST00000602165 CTDSPL2Q05D32 466 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms