RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 USP17L20D6RJB6 530 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 TNPO2O14787 897 aaKnown RBP27.55■■■□□ 2
SLC27A1-209ENST00000600297 GRK4P32298 578 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 PRKCZQ05513 592 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 USP17L24Q0WX57 530 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 SIAH1Q8IUQ4 282 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 GTF3C2Q8WUA4 911 aaPredicted RBP27.55■■■□□ 2
SLC27A1-209ENST00000600297 RUFY2Q8WXA3 655 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 LPAR1Q92633 364 aa27.55■■■□□ 2
SLC27A1-209ENST00000600297 PRPF38BQ5VTL8 546 aaKnown RBP27.54■■■□□ 2
SLC27A1-209ENST00000600297 RAD50Q92878 1312 aa27.54■■■□□ 2
SLC27A1-209ENST00000600297 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.54■■■□□ 2
SLC27A1-209ENST00000600297 BIN2Q9UBW5 565 aaPredicted RBP27.54■■■□□ 2
SLC27A1-209ENST00000600297 PRDM1O75626 825 aa27.53■■■□□ 2
SLC27A1-209ENST00000600297 EEF2P13639 858 aaKnown RBP27.53■■■□□ 2
SLC27A1-209ENST00000600297 VCAM1P19320 739 aa27.53■■■□□ 2
SLC27A1-209ENST00000600297 FAM110CQ1W6H9 321 aa27.53■■■□□ 2
SLC27A1-209ENST00000600297 DSCC1Q9BVC3 393 aa27.53■■■□□ 2
SLC27A1-209ENST00000600297 PLIN4Q96Q06 1357 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 CENPFP49454 3210 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 FGRP09769 529 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 CHMLP26374 656 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 CATSPERGQ6ZRH7 1159 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 NEDD1Q8NHV4 660 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 P2RX7Q99572 595 aaKnown RBP27.52■■■□□ 2
SLC27A1-209ENST00000600297 VCPKMTQ9H867 229 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 NYAP2Q9P242 653 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 GABRQQ9UN88 632 aa27.52■■■□□ 2
SLC27A1-209ENST00000600297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.52■■■□□ 2
SLC27A1-209ENST00000600297 TSPY3P0CV98 308 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 TSPY8P0CW00 308 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 PCP11498 1178 aaKnown RBP27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 HERVK_113P62684 666 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 CTDSPL2Q05D32 466 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 PPP4R3BQ5MIZ7 849 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 CLEC10AQ8IUN9 316 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 MYH4Q9Y623 1939 aa27.51■■□□□ 1.99
SLC27A1-209ENST00000600297 IGKV6D-41A0A0C4DH26 115 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 ORC4O43929 436 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 UBXN2AP68543 259 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 ATP2B2Q01814 1243 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 SLAIN1Q8ND83 568 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 COA7Q96BR5 231 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 RPAP3Q9H6T3 665 aaPredicted RBP27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 GOPCQ9HD26 462 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 SYNPO2Q9UMS6 1093 aa27.5■■□□□ 1.99
SLC27A1-209ENST00000600297 TFAP4Q01664 338 aa27.49■■□□□ 1.99
SLC27A1-209ENST00000600297 MTFR1Q15390 333 aa27.49■■□□□ 1.99
SLC27A1-209ENST00000600297 MORF4L1Q9UBU8 362 aa27.49■■□□□ 1.99
SLC27A1-209ENST00000600297 CTNNA3Q9UI47 895 aa27.49■■□□□ 1.99
SLC27A1-209ENST00000600297 LAMA4Q16363 1823 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 FLT3LGP49771 235 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 NT5C2P49902 561 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 BMP2KLQ5H9B9 411 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 LBX2Q6XYB7 198 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 MKL1Q969V6 931 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 MTMR4Q9NYA4 1195 aa27.48■■□□□ 1.99
SLC27A1-209ENST00000600297 TSPY2A6NKD2 308 aa27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 ZNF213O14771 459 aa27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 WDR46O15213 610 aaKnown RBP27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 ADCY3O60266 1144 aa27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 TTLL1O95922 423 aa27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 CEP95Q96GE4 821 aa27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 RNF41Q9H4P4 317 aaPredicted RBP27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 HOXC10Q9NYD6 342 aa27.47■■□□□ 1.99
SLC27A1-209ENST00000600297 COG2Q14746 738 aa27.46■■□□□ 1.99
SLC27A1-209ENST00000600297 FAM47AQ5JRC9 791 aa27.46■■□□□ 1.99
SLC27A1-209ENST00000600297 AKNAD1Q5T1N1 836 aa27.46■■□□□ 1.99
SLC27A1-209ENST00000600297 PPP4R2Q9NY27 417 aa27.46■■□□□ 1.99
SLC27A1-209ENST00000600297 PLXNB2O15031 1838 aa27.46■■□□□ 1.99
SLC27A1-209ENST00000600297 CCL5P13501 91 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 MFSD6Q6ZSS7 791 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 GPRC5AQ8NFJ5 357 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 STAG1Q8WVM7 1258 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 RBPJLQ9UBG7 517 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 CLIP2Q9UDT6 1046 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 RABGAP1Q9Y3P9 1069 aa27.45■■□□□ 1.98
SLC27A1-209ENST00000600297 SGSM2O43147 1006 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 RANBP6O60518 1105 aaKnown RBP27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 HAND2P61296 217 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 IRF5Q13568 498 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 IMMTQ16891 758 aaKnown RBP27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 KIAA1755Q5JYT7 1200 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 NKX2-3Q8TAU0 364 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 TANGO6Q9C0B7 1094 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 RNF208Q9H0X6 261 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 IL25Q9H293 177 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 INCENPQ9NQS7 918 aa27.44■■□□□ 1.98
SLC27A1-209ENST00000600297 ELNP15502 786 aa27.43■■□□□ 1.98
SLC27A1-209ENST00000600297 SPICE1Q8N0Z3 855 aa27.43■■□□□ 1.98
SLC27A1-209ENST00000600297 TOMM22Q9NS69 142 aa27.43■■□□□ 1.98
SLC27A1-209ENST00000600297 TACC3Q9Y6A5 838 aa27.43■■□□□ 1.98
SLC27A1-209ENST00000600297 RLFQ13129 1914 aa27.43■■□□□ 1.98
SLC27A1-209ENST00000600297 F5H6K3 240 aa27.42■■□□□ 1.98
SLC27A1-209ENST00000600297 ERVK-9P63128 1117 aa27.42■■□□□ 1.98
SLC27A1-209ENST00000600297 ERVK-24P63145 666 aa27.42■■□□□ 1.98
SLC27A1-209ENST00000600297 KLRC3Q07444 240 aa27.42■■□□□ 1.98
SLC27A1-209ENST00000600297 PXYLP1Q8TE99 480 aa27.42■■□□□ 1.98
SLC27A1-209ENST00000600297 PARP14Q460N5 1801 aa27.41■■□□□ 1.98
SLC27A1-209ENST00000600297 SPDYE16A6NNV3 312 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms