RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 FAM227BQ96M60 508 aa26.94■■□□□ 1.9
CCDC9-204ENST00000599398 OSBPL3Q9H4L5 887 aa26.94■■□□□ 1.9
CCDC9-204ENST00000599398 BRCA2P51587 3418 aa26.94■■□□□ 1.9
CCDC9-204ENST00000599398 A0A0D9SFI3 127 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 RAD21O60216 631 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 SLC3A2P08195 630 aaKnown RBP26.93■■□□□ 1.9
CCDC9-204ENST00000599398 PPARAQ07869 468 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 Q3C1V9 767 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 KIAA1755Q5JYT7 1200 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 LPAR1Q92633 364 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 VCPKMTQ9H867 229 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 RABGAP1Q9Y3P9 1069 aa26.93■■□□□ 1.9
CCDC9-204ENST00000599398 ELNP15502 786 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 UBXN2AP68543 259 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 IRF5Q13568 498 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 MTFR1Q15390 333 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 MCMDC2Q4G0Z9 681 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 POTEEQ6S8J3 1075 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 TICAM2Q86XR7 235 aa26.92■■□□□ 1.9
CCDC9-204ENST00000599398 CWC22Q9HCG8 908 aaKnown RBP26.92■■□□□ 1.9
CCDC9-204ENST00000599398 GREB1LQ9C091 1923 aaPredicted RBP26.91■■□□□ 1.9
CCDC9-204ENST00000599398 SPDYE16A6NNV3 312 aaPredicted RBP26.91■■□□□ 1.9
CCDC9-204ENST00000599398 TNRC18O15417 2968 aaPredicted RBP26.91■■□□□ 1.9
CCDC9-204ENST00000599398 EN2P19622 333 aaPredicted RBP26.91■■□□□ 1.9
CCDC9-204ENST00000599398 MAPK4P31152 587 aa26.91■■□□□ 1.9
CCDC9-204ENST00000599398 PDE4BQ07343 736 aa26.91■■□□□ 1.9
CCDC9-204ENST00000599398 NMIQ13287 307 aaPredicted RBP26.91■■□□□ 1.9
CCDC9-204ENST00000599398 VPS53Q5VIR6 699 aa26.91■■□□□ 1.9
CCDC9-204ENST00000599398 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.91■■□□□ 1.9
CCDC9-204ENST00000599398 GOPCQ9HD26 462 aa26.91■■□□□ 1.9
CCDC9-204ENST00000599398 FOXP2O15409 715 aa26.9■■□□□ 1.9
CCDC9-204ENST00000599398 CCNA1P78396 465 aa26.9■■□□□ 1.9
CCDC9-204ENST00000599398 COG2Q14746 738 aa26.9■■□□□ 1.9
CCDC9-204ENST00000599398 PXYLP1Q8TE99 480 aa26.9■■□□□ 1.9
CCDC9-204ENST00000599398 PORCNQ9H237 461 aa26.9■■□□□ 1.9
CCDC9-204ENST00000599398 HOXC10Q9NYD6 342 aa26.9■■□□□ 1.9
CCDC9-204ENST00000599398 PDE4DIPQ5VU43 2346 aa26.89■■□□□ 1.9
CCDC9-204ENST00000599398 CNMDO75829 334 aa26.89■■□□□ 1.9
CCDC9-204ENST00000599398 SAMD1Q6SPF0 538 aaPredicted RBP26.89■■□□□ 1.9
CCDC9-204ENST00000599398 LBX2Q6XYB7 198 aa26.89■■□□□ 1.9
CCDC9-204ENST00000599398 WDR46O15213 610 aaKnown RBP26.88■■□□□ 1.89
CCDC9-204ENST00000599398 FLOT1O75955 427 aa26.88■■□□□ 1.89
CCDC9-204ENST00000599398 SDSP20132 328 aa26.88■■□□□ 1.89
CCDC9-204ENST00000599398 WDR78Q5VTH9 848 aa26.88■■□□□ 1.89
CCDC9-204ENST00000599398 NUDT12Q9BQG2 462 aa26.88■■□□□ 1.89
CCDC9-204ENST00000599398 BTBD7Q9P203 1132 aa26.88■■□□□ 1.89
CCDC9-204ENST00000599398 GJD2Q9UKL4 321 aa26.88■■□□□ 1.89
CCDC9-204ENST00000599398 MYH4Q9Y623 1939 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 INHAP05111 366 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 TSPY3P0CV98 308 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 TSPY8P0CW00 308 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 CCL5P13501 91 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 CTDSPL2Q05D32 466 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 GPR142Q7Z601 462 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 PLEKHH3Q7Z736 793 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 RNF208Q9H0X6 261 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 NYAP2Q9P242 653 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 PLXNB2O15031 1838 aa26.87■■□□□ 1.89
CCDC9-204ENST00000599398 ZNF589Q86UQ0 364 aaPredicted RBP26.86■■□□□ 1.89
CCDC9-204ENST00000599398 SOCS4Q8WXH5 440 aa26.86■■□□□ 1.89
CCDC9-204ENST00000599398 DIAPH3Q9NSV4 1193 aa26.86■■□□□ 1.89
CCDC9-204ENST00000599398 CLIP2Q9UDT6 1046 aa26.86■■□□□ 1.89
CCDC9-204ENST00000599398 RLFQ13129 1914 aa26.86■■□□□ 1.89
CCDC9-204ENST00000599398 CCDC171Q6TFL3 1326 aa26.86■■□□□ 1.89
CCDC9-204ENST00000599398 CYP2B6P20813 491 aa26.85■■□□□ 1.89
CCDC9-204ENST00000599398 PDE4AP27815 886 aa26.85■■□□□ 1.89
CCDC9-204ENST00000599398 DSG3P32926 999 aa26.85■■□□□ 1.89
CCDC9-204ENST00000599398 FAM47AQ5JRC9 791 aa26.85■■□□□ 1.89
CCDC9-204ENST00000599398 MKI67P46013 3256 aaKnown RBP26.84■■□□□ 1.89
CCDC9-204ENST00000599398 IGKV6D-41A0A0C4DH26 115 aa26.84■■□□□ 1.89
CCDC9-204ENST00000599398 HSPD1P10809 573 aaKnown RBP26.84■■□□□ 1.89
CCDC9-204ENST00000599398 MFAP1P55081 439 aaKnown RBP26.84■■□□□ 1.89
CCDC9-204ENST00000599398 TFAP4Q01664 338 aa26.84■■□□□ 1.89
CCDC9-204ENST00000599398 ALX1Q15699 326 aa26.84■■□□□ 1.89
CCDC9-204ENST00000599398 CEP95Q96GE4 821 aa26.84■■□□□ 1.89
CCDC9-204ENST00000599398 UNC93B1Q9H1C4 597 aa26.84■■□□□ 1.89
CCDC9-204ENST00000599398 PLS1Q14651 629 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 FAM83BQ5T0W9 1011 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 CWC27Q6UX04 472 aaKnown RBP26.83■■□□□ 1.89
CCDC9-204ENST00000599398 MB21D1Q8N884 522 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 NEDD1Q8NHV4 660 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 ATG4CQ96DT6 458 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 MTMR4Q9NYA4 1195 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 PARP14Q460N5 1801 aa26.83■■□□□ 1.89
CCDC9-204ENST00000599398 HIP1O00291 1037 aa26.82■■□□□ 1.88
CCDC9-204ENST00000599398 TTLL1O95922 423 aa26.82■■□□□ 1.88
CCDC9-204ENST00000599398 FGAP02671 866 aa26.82■■□□□ 1.88
CCDC9-204ENST00000599398 HMGCRP04035 888 aa26.82■■□□□ 1.88
CCDC9-204ENST00000599398 INCENPQ9NQS7 918 aa26.82■■□□□ 1.88
CCDC9-204ENST00000599398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.82■■□□□ 1.88
CCDC9-204ENST00000599398 IVNS1ABPQ9Y6Y0 642 aa26.82■■□□□ 1.88
CCDC9-204ENST00000599398 TSPY2A6NKD2 308 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 F5H6K3 240 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 GJB1P08034 283 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 RGS2P41220 211 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 KLRC3Q07444 240 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 NKX2-3Q8TAU0 364 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 NUP88Q99567 741 aaPredicted RBP26.81■■□□□ 1.88
CCDC9-204ENST00000599398 MOV10L1Q9BXT6 1211 aaKnown RBP26.81■■□□□ 1.88
CCDC9-204ENST00000599398 SPATC1LQ9H0A9 340 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms