RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MAP3K12Q12852 859 aa20■□□□□ 0.79
SHKBP1-215ENST00000597649 ANO1Q5XXA6 986 aa20■□□□□ 0.79
SHKBP1-215ENST00000597649 COG2Q14746 738 aa19.99■□□□□ 0.79
SHKBP1-215ENST00000597649 SLC39A5Q6ZMH5 540 aa19.99■□□□□ 0.79
SHKBP1-215ENST00000597649 DPP9Q86TI2 863 aa19.99■□□□□ 0.79
SHKBP1-215ENST00000597649 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.99■□□□□ 0.79
SHKBP1-215ENST00000597649 ATP11BQ9Y2G3 1177 aa19.99■□□□□ 0.79
SHKBP1-215ENST00000597649 FRMPD3Q5JV73 1810 aa19.99■□□□□ 0.79
SHKBP1-215ENST00000597649 POLR3DP05423 398 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 SHHQ15465 462 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 PRAMEF19Q5SWL8 479 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 OLFML2BQ68BL8 750 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 SIAH1Q8IUQ4 282 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 HOXC10Q9NYD6 342 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
SHKBP1-215ENST00000597649 ERCC3P19447 782 aa19.97■□□□□ 0.79
SHKBP1-215ENST00000597649 C9orf50Q5SZB4 431 aa19.97■□□□□ 0.79
SHKBP1-215ENST00000597649 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
SHKBP1-215ENST00000597649 MAGEB6P1A0A0J9YX57 407 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 STRNO43815 780 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 CYP2D6P10635 497 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 TMED8Q6PL24 325 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 SH3RF1Q7Z6J0 888 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 AACSQ86V21 672 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 SLC44A5Q8NCS7 719 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 ARRDC4Q8NCT1 418 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 MCM9Q9NXL9 1143 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 PRKAG2Q9UGJ0 569 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 EXOC6BQ9Y2D4 811 aa19.96■□□□□ 0.79
SHKBP1-215ENST00000597649 MPHOSPH10O00566 681 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 SEPT4O43236 478 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 PDE6AP16499 860 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 SNX17Q15036 470 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 SHCBP1Q8NEM2 672 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 BADQ92934 168 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 CDX2Q99626 313 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 TANGO6Q9C0B7 1094 aa19.95■□□□□ 0.78
SHKBP1-215ENST00000597649 TCRBV5S4A2TA0A5A2 114 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 TRIM43BA6NCK2 446 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 SMIM22K7EJ46 135 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 DSG3P32926 999 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 ADCYAP1R1P41586 468 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 TRIM60Q495X7 471 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 SLC9C2Q5TAH2 1124 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 CLEC10AQ8IUN9 316 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 SDR42E1Q8WUS8 393 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 FERMT2Q96AC1 680 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 TRIM43Q96BQ3 446 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 SEMA6BQ9H3T3 888 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 RLFQ13129 1914 aa19.94■□□□□ 0.78
SHKBP1-215ENST00000597649 MYCNP04198 464 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 LRRC41Q15345 812 aa19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 ZNF697Q5TEC3 545 aa19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 ATG4CQ96DT6 458 aa19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 DYNLL2Q96FJ2 89 aa19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 CRNKL1Q9BZJ0 848 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 IL1RAPL2Q9NP60 686 aa19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 DCP1AQ9NPI6 582 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 PRDM5Q9NQX1 630 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 PDLIM7Q9NR12 457 aa19.93■□□□□ 0.78
SHKBP1-215ENST00000597649 KBTBD13C9JR72 458 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 ITGB8P26012 769 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 PLS1Q14651 629 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 SLFNL1Q499Z3 407 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 NCAPG2Q86XI2 1143 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 FTSJ3Q8IY81 847 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 SPICE1Q8N0Z3 855 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 LCORLQ8N3X6 602 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 MAML3Q96JK9 1138 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 TTYH1Q9H313 450 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 ZNF532Q9HCE3 1301 aa19.92■□□□□ 0.78
SHKBP1-215ENST00000597649 LTBP2Q14767 1821 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 PRKAB2O43741 272 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 AKR1B1P15121 316 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 TMEM179Q6ZVK1 233 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 ABRAQ8N0Z2 381 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 MB21D1Q8N884 522 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 MROH8Q9H579 483 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 TMX2Q9Y320 296 aa19.91■□□□□ 0.78
SHKBP1-215ENST00000597649 FLOT1O75955 427 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 TLE2Q04725 743 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 TMEM132BQ14DG7 1078 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 C1orf53Q5VUE5 145 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 ERC1Q8IUD2 1116 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 RHPN1Q8TCX5 695 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 MUC3AQ02505 3323 aa19.9■□□□□ 0.78
SHKBP1-215ENST00000597649 GOLIM4O00461 696 aa19.89■□□□□ 0.77
SHKBP1-215ENST00000597649 TAL1P17542 331 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-215ENST00000597649 EPHB4P54760 987 aa19.89■□□□□ 0.77
SHKBP1-215ENST00000597649 TTF1Q15361 905 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-215ENST00000597649 ARMT1Q9H993 441 aa19.89■□□□□ 0.77
SHKBP1-215ENST00000597649 ZNF236Q9UL36 1845 aa19.89■□□□□ 0.77
SHKBP1-215ENST00000597649 SMCHD1A6NHR9 2005 aa19.88■□□□□ 0.77
SHKBP1-215ENST00000597649 CYP2D7A0A087X1C5 515 aa19.88■□□□□ 0.77
SHKBP1-215ENST00000597649 SMAD3P84022 425 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-215ENST00000597649 SAMD1Q6SPF0 538 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms