RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 PDE6AP16499 860 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 MX1P20591 662 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 PTPREP23469 700 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 CCNA1P78396 465 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 CERKLQ49MI3 558 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-206ENST00000596436 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 FEZ1Q99689 392 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 RLFQ13129 1914 aa19.21■□□□□ 0.67
USHBP1-206ENST00000596436 TCRBV5S4A2TA0A5A2 114 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 SLC15A5A6NIM6 579 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
USHBP1-206ENST00000596436 CHGBP05060 677 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 PLCD1P51178 756 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 NUCB1Q02818 461 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 GRB14Q14449 540 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 LRRC26Q2I0M4 334 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
USHBP1-206ENST00000596436 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
USHBP1-206ENST00000596436 SPDYE16A6NNV3 312 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-206ENST00000596436 RAB3GAP1Q15042 981 aa19.19■□□□□ 0.66
USHBP1-206ENST00000596436 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
USHBP1-206ENST00000596436 CHD1LQ86WJ1 897 aa19.19■□□□□ 0.66
USHBP1-206ENST00000596436 ZBTB47Q9UFB7 747 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-206ENST00000596436 ZNF532Q9HCE3 1301 aa19.19■□□□□ 0.66
USHBP1-206ENST00000596436 UNC80Q8N2C7 3258 aa19.19■□□□□ 0.66
USHBP1-206ENST00000596436 SLC17A8Q8NDX2 589 aa19.18■□□□□ 0.66
USHBP1-206ENST00000596436 ADD2P35612 726 aa19.17■□□□□ 0.66
USHBP1-206ENST00000596436 PDE1AP54750 535 aa19.17■□□□□ 0.66
USHBP1-206ENST00000596436 MFSD14CQ5VZR4 134 aa19.17■□□□□ 0.66
USHBP1-206ENST00000596436 UBE2OQ9C0C9 1292 aaKnown RBP19.17■□□□□ 0.66
USHBP1-206ENST00000596436 RPAP3Q9H6T3 665 aaPredicted RBP19.17■□□□□ 0.66
USHBP1-206ENST00000596436 CABP5Q9NP86 173 aa19.17■□□□□ 0.66
USHBP1-206ENST00000596436 CUL9Q8IWT3 2517 aa19.17■□□□□ 0.66
USHBP1-206ENST00000596436 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 ERC2O15083 957 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 MSCO60682 206 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 SEPT2Q15019 361 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 DEFB123Q8N688 67 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 NPLOC4Q8TAT6 608 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 DDX20Q9UHI6 824 aaKnown RBP19.16■□□□□ 0.66
USHBP1-206ENST00000596436 LTBP2Q14767 1821 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
USHBP1-206ENST00000596436 MAGEB6P1A0A0J9YX57 407 aa19.15■□□□□ 0.66
USHBP1-206ENST00000596436 EVX2Q03828 476 aa19.15■□□□□ 0.66
USHBP1-206ENST00000596436 KBTBD3Q8NAB2 608 aa19.15■□□□□ 0.66
USHBP1-206ENST00000596436 TRPV1Q8NER1 839 aa19.15■□□□□ 0.66
USHBP1-206ENST00000596436 LPAR1Q92633 364 aa19.15■□□□□ 0.66
USHBP1-206ENST00000596436 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
USHBP1-206ENST00000596436 MTMR10Q9NXD2 777 aa19.15■□□□□ 0.66
USHBP1-206ENST00000596436 CYBAP13498 195 aa19.14■□□□□ 0.65
USHBP1-206ENST00000596436 Q7L0L9 218 aa19.14■□□□□ 0.65
USHBP1-206ENST00000596436 CRNKL1Q9BZJ0 848 aaKnown RBP19.14■□□□□ 0.65
USHBP1-206ENST00000596436 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.14■□□□□ 0.65
USHBP1-206ENST00000596436 STXBP5LQ9Y2K9 1186 aa19.14■□□□□ 0.65
USHBP1-206ENST00000596436 IVNS1ABPQ9Y6Y0 642 aa19.14■□□□□ 0.65
USHBP1-206ENST00000596436 DNM1LO00429 736 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 DLL1O00548 723 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 STRNO43815 780 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-206ENST00000596436 PDE4AP27815 886 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 COG2Q14746 738 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 UBE3CQ15386 1083 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 OLFML2BQ68BL8 750 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 PLEKHM2Q8IWE5 1019 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 LCORLQ8N3X6 602 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 SHCBP1Q8NEM2 672 aa19.13■□□□□ 0.65
USHBP1-206ENST00000596436 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
USHBP1-206ENST00000596436 DCP1AQ9NPI6 582 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-206ENST00000596436 MYH8P13535 1937 aa19.12■□□□□ 0.65
USHBP1-206ENST00000596436 CYP2C19P33261 490 aa19.12■□□□□ 0.65
USHBP1-206ENST00000596436 WDR78Q5VTH9 848 aa19.12■□□□□ 0.65
USHBP1-206ENST00000596436 ARMT1Q9H993 441 aa19.12■□□□□ 0.65
USHBP1-206ENST00000596436 MCM9Q9NXL9 1143 aa19.12■□□□□ 0.65
USHBP1-206ENST00000596436 HOXC10Q9NYD6 342 aa19.12■□□□□ 0.65
USHBP1-206ENST00000596436 MBD4O95243 580 aa19.11■□□□□ 0.65
USHBP1-206ENST00000596436 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-206ENST00000596436 MDM2Q00987 491 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-206ENST00000596436 KIAA1755Q5JYT7 1200 aa19.11■□□□□ 0.65
USHBP1-206ENST00000596436 ZSCAN25Q6NSZ9 544 aa19.11■□□□□ 0.65
USHBP1-206ENST00000596436 TMEM179Q6ZVK1 233 aa19.11■□□□□ 0.65
USHBP1-206ENST00000596436 SIAH1Q8IUQ4 282 aa19.11■□□□□ 0.65
USHBP1-206ENST00000596436 SENP6Q9GZR1 1112 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-206ENST00000596436 SPATC1LQ9H0A9 340 aa19.11■□□□□ 0.65
USHBP1-206ENST00000596436 BAZ2AQ9UIF9 1905 aaKnown RBP19.11■□□□□ 0.65
USHBP1-206ENST00000596436 POTEB2H3BUK9 544 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 ADORA2AP29274 412 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 FAM109BQ6ICB4 259 aaPredicted RBP19.1■□□□□ 0.65
USHBP1-206ENST00000596436 ABRAQ8N0Z2 381 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 SDR42E1Q8WUS8 393 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 PUS7LQ9H0K6 701 aaKnown RBP19.1■□□□□ 0.65
USHBP1-206ENST00000596436 OSBPL3Q9H4L5 887 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 SWAP70Q9UH65 585 aa19.1■□□□□ 0.65
USHBP1-206ENST00000596436 RNF113AO15541 343 aaKnown RBP19.09■□□□□ 0.65
USHBP1-206ENST00000596436 CYP2D6P10635 497 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms