RNA–Protein interactions for RNA: ENST00000595287.1

SOX2-OT-223, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 581 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-223ENST00000595287 CTR9Q6PD62 1173 aa16.33■□□□□ 0.2
SOX2-OT-223ENST00000595287 NPLOC4Q8TAT6 608 aa16.33■□□□□ 0.2
SOX2-OT-223ENST00000595287 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-223ENST00000595287 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.2
SOX2-OT-223ENST00000595287 PFASO15067 1338 aa16.33■□□□□ 0.2
SOX2-OT-223ENST00000595287 PTPREP23469 700 aa16.32■□□□□ 0.2
SOX2-OT-223ENST00000595287 MAP2K5Q13163 448 aa16.32■□□□□ 0.2
SOX2-OT-223ENST00000595287 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
SOX2-OT-223ENST00000595287 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
SOX2-OT-223ENST00000595287 OTUD7AQ8TE49 926 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-223ENST00000595287 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
SOX2-OT-223ENST00000595287 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 RGS2P41220 211 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 GRB14Q14449 540 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 SPICE1Q8N0Z3 855 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 ANKLE1Q8NAG6 615 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 TRPV1Q8NER1 839 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 STRBPQ96SI9 672 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 APBA2Q99767 749 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 SWAP70Q9UH65 585 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
SOX2-OT-223ENST00000595287 GSG1L2A8MUP6 293 aa16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 EVI5O60447 810 aa16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 HOXC6P09630 235 aa16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 COL6A1P12109 1028 aa16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-223ENST00000595287 SLC15A5A6NIM6 579 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 CAPN2P17655 700 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 DSG3P32926 999 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 ICA1Q05084 483 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 COG2Q14746 738 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 KBTBD3Q8NAB2 608 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
SOX2-OT-223ENST00000595287 M0R2C6 588 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 COBLO75128 1261 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 EEF2P13639 858 aaKnown RBP16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 CYP2C19P33261 490 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 WDR78Q5VTH9 848 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 NR2E3Q9Y5X4 410 aa16.28■□□□□ 0.2
SOX2-OT-223ENST00000595287 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 LAMA2P24043 3122 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 SOX1O00570 391 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 ERCC3P19447 782 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 RASA1P20936 1047 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 CCNA1P78396 465 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 TRMT44Q8IYL2 757 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 CCDC17Q96LX7 622 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 C11orf49Q9H6J7 331 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
SOX2-OT-223ENST00000595287 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
SOX2-OT-223ENST00000595287 COL6A3P12111 3177 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 ADORA2AP29274 412 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 APPBP2Q92624 585 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 GDF15Q99988 308 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 HOXC10Q9NYD6 342 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
SOX2-OT-223ENST00000595287 FOXP2O15409 715 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 RNF113AO15541 343 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 FLOT1O75955 427 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 CYBAP13498 195 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 SYN1P17600 705 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 ZSCAN25Q6NSZ9 544 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 REPS2Q8NFH8 660 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 LPAR1Q92633 364 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
SOX2-OT-223ENST00000595287 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
SOX2-OT-223ENST00000595287 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
SOX2-OT-223ENST00000595287 GPAA1O43292 621 aa16.24■□□□□ 0.19
SOX2-OT-223ENST00000595287 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-223ENST00000595287 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
SOX2-OT-223ENST00000595287 ARPP21Q9UBL0 812 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-223ENST00000595287 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-223ENST00000595287 PRAMEF19Q5SWL8 479 aa16.23■□□□□ 0.19
SOX2-OT-223ENST00000595287 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
SOX2-OT-223ENST00000595287 LRCH3Q96II8 777 aa16.23■□□□□ 0.19
SOX2-OT-223ENST00000595287 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms