RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 ERVK-24P63145 666 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 ICA1Q05084 483 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 USP17L24Q0WX57 530 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 SBK1Q52WX2 424 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 CATSPERGQ6ZRH7 1159 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 CCDC129Q6ZRS4 1044 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 SMC5Q8IY18 1101 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 AMOTL1Q8IY63 956 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 SLAIN1Q8ND83 568 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 COA7Q96BR5 231 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 DDRGK1Q96HY6 314 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 PAGR1Q9BTK6 254 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.02□□□□□ -1.29
SSX4B-201ENST00000595235 TMEM106CQ9BVX2 250 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 LNPKQ9C0E8 428 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 UNC93B1Q9H1C4 597 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 PORCNQ9H237 461 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 RPAP3Q9H6T3 665 aaPredicted RBP7.02□□□□□ -1.29
SSX4B-201ENST00000595235 STAP2Q9UGK3 403 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 GJD2Q9UKL4 321 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 TAOK2Q9UL54 1235 aa7.02□□□□□ -1.29
SSX4B-201ENST00000595235 ZNF236Q9UL36 1845 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 MINDY4BA8MYZ0 360 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 CCL5P13501 91 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 RASA1P20936 1047 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 TDO2P48775 406 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 CLCN6P51797 869 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 UBXN2AP68543 259 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 TRIM32Q13049 653 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 AAMPQ13685 434 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 B4GALNT3Q6L9W6 998 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 GIMAP6Q6P9H5 292 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 IFNL3Q8IZI9 196 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 SPICE1Q8N0Z3 855 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 GPRC5AQ8NFJ5 357 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 PXYLP1Q8TE99 480 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 GTF3C2Q8WUA4 911 aaPredicted RBP7.01□□□□□ -1.29
SSX4B-201ENST00000595235 TRIB2Q92519 343 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 CCDC17Q96LX7 622 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 PHF12Q96QT6 1004 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 ARHGEF10LQ9HCE6 1279 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 BTBD7Q9P203 1132 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
SSX4B-201ENST00000595235 TMX2Q9Y320 296 aa7.01□□□□□ -1.29
SSX4B-201ENST00000595235 TNRC18O15417 2968 aaPredicted RBP7□□□□□ -1.29
SSX4B-201ENST00000595235 PATL2C9JE40 543 aaKnown RBP7□□□□□ -1.29
SSX4B-201ENST00000595235 PRDM1O75626 825 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 APPP05067 770 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 EEF2P13639 858 aaKnown RBP7□□□□□ -1.29
SSX4B-201ENST00000595235 GNAT2P19087 354 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 CYP2B6P20813 491 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 GJA8P48165 433 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 IRX6P78412 446 aaPredicted RBP7□□□□□ -1.29
SSX4B-201ENST00000595235 LRRFIP1Q32MZ4 808 aaKnown RBP7□□□□□ -1.29
SSX4B-201ENST00000595235 VPS53Q5VIR6 699 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 LBX2Q6XYB7 198 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 GPR142Q7Z601 462 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 EVI5LQ96CN4 794 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 FAM227BQ96M60 508 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 TANGO6Q9C0B7 1094 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 RNF208Q9H0X6 261 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 RWDD1Q9H446 243 aaPredicted RBP7□□□□□ -1.29
SSX4B-201ENST00000595235 VCPKMTQ9H867 229 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 RABGAP1Q9Y3P9 1069 aa7□□□□□ -1.29
SSX4B-201ENST00000595235 BRCA2P51587 3418 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 ALPK3Q96L96 1907 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 CENPFP49454 3210 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 LAMA4Q16363 1823 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 PLIN4Q96Q06 1357 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 IGKV6D-41A0A0C4DH26 115 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 A0A0D9SFI3 127 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 WDR46O15213 610 aaKnown RBP6.99□□□□□ -1.29
SSX4B-201ENST00000595235 HMGCRP04035 888 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 GJB1P08034 283 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 MAPK4P31152 587 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 ATP2B2Q01814 1243 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 NUCB1Q02818 461 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 PPARAQ07869 468 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 COG2Q14746 738 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 CCL14Q16627 93 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 MORN1Q5T089 497 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 PRPF38BQ5VTL8 546 aaKnown RBP6.99□□□□□ -1.29
SSX4B-201ENST00000595235 PLEKHH3Q7Z736 793 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 CHD1LQ86WJ1 897 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 U2AF1L4Q8WU68 220 aaKnown RBP6.99□□□□□ -1.29
SSX4B-201ENST00000595235 SOCS4Q8WXH5 440 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 LPAR1Q92633 364 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 USP6NLQ92738 828 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 ATG4CQ96DT6 458 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 NUDT12Q9BQG2 462 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.99□□□□□ -1.29
SSX4B-201ENST00000595235 NAPBQ9H115 298 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 SH2D4AQ9H788 454 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 KANSL2Q9H9L4 492 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 MKNK2Q9HBH9 465 aa6.99□□□□□ -1.29
SSX4B-201ENST00000595235 PAK6Q9NQU5 681 aaPredicted RBP6.99□□□□□ -1.29
SSX4B-201ENST00000595235 TACC3Q9Y6A5 838 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms