RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
VRK3-207ENST00000594092 GH2P01242 217 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 SEPT2Q15019 361 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 DPY19L2Q6NUT2 758 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 LRRC47Q8N1G4 583 aaKnown RBP17.63■□□□□ 0.41
VRK3-207ENST00000594092 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 SRBD1Q8N5C6 995 aaKnown RBP17.63■□□□□ 0.41
VRK3-207ENST00000594092 CHAMP1Q96JM3 812 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 C8orf76Q96K31 380 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 RNF26Q9BY78 433 aaPredicted RBP17.63■□□□□ 0.41
VRK3-207ENST00000594092 ADARB2Q9NS39 739 aaKnown RBP17.63■□□□□ 0.41
VRK3-207ENST00000594092 GGA3Q9NZ52 723 aa17.63■□□□□ 0.41
VRK3-207ENST00000594092 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
VRK3-207ENST00000594092 GUCY1B3Q02153 619 aa17.62■□□□□ 0.41
VRK3-207ENST00000594092 RASGRP2Q7LDG7 609 aa17.62■□□□□ 0.41
VRK3-207ENST00000594092 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
VRK3-207ENST00000594092 CABP5Q9NP86 173 aa17.62■□□□□ 0.41
VRK3-207ENST00000594092 NYAP2Q9P242 653 aa17.62■□□□□ 0.41
VRK3-207ENST00000594092 PALM3A6NDB9 673 aaPredicted RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 DEXIO95424 95 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 EEF2P13639 858 aaKnown RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 GNAQP50148 359 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 ATP2B2Q01814 1243 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 ICA1Q05084 483 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 OTUD7BQ6GQQ9 843 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 SIAH1Q8IUQ4 282 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 WASF1Q92558 559 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 L3MBTL3Q96JM7 780 aaPredicted RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 MYH4Q9Y623 1939 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 USP17L5A8MUK1 530 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 PRPF3O43395 683 aaKnown RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 SKOR2Q2VWA4 1001 aaPredicted RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
VRK3-207ENST00000594092 RGS22Q8NE09 1264 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 MKL1Q969V6 931 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 GJB4Q9NTQ9 266 aa17.61■□□□□ 0.41
VRK3-207ENST00000594092 TRAK2O60296 914 aa17.6■□□□□ 0.41
VRK3-207ENST00000594092 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
VRK3-207ENST00000594092 SNHG28P0DPA3 235 aa17.6■□□□□ 0.41
VRK3-207ENST00000594092 PDHBP11177 359 aa17.6■□□□□ 0.41
VRK3-207ENST00000594092 AKAP17AQ02040 695 aaKnown RBP17.6■□□□□ 0.41
VRK3-207ENST00000594092 RESTQ13127 1097 aa17.6■□□□□ 0.41
VRK3-207ENST00000594092 NBPF12Q5TAG4 269 aaPredicted RBP17.6■□□□□ 0.41
VRK3-207ENST00000594092 USP17L2Q6R6M4 530 aa17.6■□□□□ 0.41
VRK3-207ENST00000594092 V9GY48 417 aaPredicted RBP17.6■□□□□ 0.41
VRK3-207ENST00000594092 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 GOLGA8HP0CJ92 632 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 CAP2P40123 477 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 PKN1Q16512 942 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 MYH6P13533 1939 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
VRK3-207ENST00000594092 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.41
VRK3-207ENST00000594092 PHF20L1A8MW92 1017 aa17.58■□□□□ 0.41
VRK3-207ENST00000594092 SLC35G1Q2M3R5 365 aa17.58■□□□□ 0.41
VRK3-207ENST00000594092 KRT40Q6A162 431 aa17.58■□□□□ 0.41
VRK3-207ENST00000594092 LZTS2Q9BRK4 669 aa17.58■□□□□ 0.41
VRK3-207ENST00000594092 BAZ2BQ9UIF8 2168 aaKnown RBP17.58■□□□□ 0.41
VRK3-207ENST00000594092 KLRF2D3W0D1 207 aa17.58■□□□□ 0.4
VRK3-207ENST00000594092 ZSCAN16Q9H4T2 348 aaPredicted RBP17.58■□□□□ 0.4
VRK3-207ENST00000594092 PPP2R3BQ9Y5P8 575 aa17.58■□□□□ 0.4
VRK3-207ENST00000594092 CYTH3O43739 400 aa17.57■□□□□ 0.4
VRK3-207ENST00000594092 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
VRK3-207ENST00000594092 PRAMEF18Q5VWM3 479 aa17.57■□□□□ 0.4
VRK3-207ENST00000594092 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
VRK3-207ENST00000594092 TRIM29Q14134 588 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 FAM173BQ6P4H8 233 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 LMBRD1Q9NUN5 540 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 RBM27Q9P2N5 1060 aaKnown RBP17.56■□□□□ 0.4
VRK3-207ENST00000594092 POLR2AP24928 1970 aaKnown RBP17.56■□□□□ 0.4
VRK3-207ENST00000594092 FRMPD2Q68DX3 1309 aaPredicted RBP17.56■□□□□ 0.4
VRK3-207ENST00000594092 A0A1W2PRG0 241 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 PRPF40AO75400 957 aaKnown RBP17.56■□□□□ 0.4
VRK3-207ENST00000594092 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 DCAF15Q66K64 600 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 HOOK2Q96ED9 719 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 CPVLQ9H3G5 476 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
VRK3-207ENST00000594092 TCHHQ07283 1943 aa17.56■□□□□ 0.4
VRK3-207ENST00000594092 ASNSP08243 561 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 EPHX2P34913 555 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 KIF23Q02241 960 aaPredicted RBP17.55■□□□□ 0.4
VRK3-207ENST00000594092 PFKFB3Q16875 520 aaPredicted RBP17.55■□□□□ 0.4
VRK3-207ENST00000594092 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
VRK3-207ENST00000594092 SHISA4Q96DD7 197 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
VRK3-207ENST00000594092 SCG2P13521 617 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 VEGFAP15692 232 aaPredicted RBP17.54■□□□□ 0.4
VRK3-207ENST00000594092 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 DCAF4Q8WV16 495 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 DCPSQ96C86 337 aaKnown RBP17.54■□□□□ 0.4
VRK3-207ENST00000594092 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms